RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
VCAN-212ENST00000515397 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
VCAN-212ENST00000515397 GPTP24298 496 aa15□□□□□ -0.01
VCAN-212ENST00000515397 NBPF5PQ86XG9 351 aaPredicted RBP15□□□□□ -0.01
VCAN-212ENST00000515397 CNBD1Q8NA66 436 aa15□□□□□ -0.01
VCAN-212ENST00000515397 ZNF526Q8TF50 670 aaPredicted RBP15□□□□□ -0.01
VCAN-212ENST00000515397 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.01
VCAN-212ENST00000515397 ZNF428Q96B54 188 aa15□□□□□ -0.01
VCAN-212ENST00000515397 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
VCAN-212ENST00000515397 H0YIN7 160 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 KIAA1551Q9HCM1 1747 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 AFDNP55196 1824 aaKnown RBP14.99□□□□□ -0.01
VCAN-212ENST00000515397 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
VCAN-212ENST00000515397 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 KIF6Q6ZMV9 814 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 LRP10Q7Z4F1 713 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 BRIP1Q9BX63 1249 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 CHD4Q14839 1912 aa14.98□□□□□ -0.01
VCAN-212ENST00000515397 DUSP27Q5VZP5 1158 aa14.97□□□□□ -0.01
VCAN-212ENST00000515397 COPS6Q7L5N1 327 aa14.97□□□□□ -0.01
VCAN-212ENST00000515397 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
VCAN-212ENST00000515397 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
VCAN-212ENST00000515397 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
VCAN-212ENST00000515397 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.01
VCAN-212ENST00000515397 ST5P78524 1137 aa14.96□□□□□ -0.01
VCAN-212ENST00000515397 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
VCAN-212ENST00000515397 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
VCAN-212ENST00000515397 ERVV-1B6SEH8 477 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 PDE6BP35913 854 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 SUSD4Q5VX71 490 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 TPTE2Q6XPS3 522 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
VCAN-212ENST00000515397 SCN7AQ01118 1682 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
VCAN-212ENST00000515397 C21orf2O43822 256 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 GNAI1P63096 354 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 RASSF7Q02833 373 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 C9orf131Q5VYM1 1079 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
VCAN-212ENST00000515397 DDX21Q9NR30 783 aaKnown RBP eCLIP14.94□□□□□ -0.02
VCAN-212ENST00000515397 ERBB4Q15303 1308 aa14.93□□□□□ -0.02
VCAN-212ENST00000515397 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
VCAN-212ENST00000515397 ATP10DQ9P241 1426 aa14.93□□□□□ -0.02
VCAN-212ENST00000515397 NRXN2Q9P2S2 1712 aa14.93□□□□□ -0.02
VCAN-212ENST00000515397 GIGYF2Q6Y7W6 1299 aaKnown RBP14.93□□□□□ -0.02
VCAN-212ENST00000515397 TSPYL6Q8N831 410 aa14.93□□□□□ -0.02
VCAN-212ENST00000515397 SRGNP10124 158 aa14.92□□□□□ -0.02
VCAN-212ENST00000515397 PRELPP51888 382 aa14.92□□□□□ -0.02
VCAN-212ENST00000515397 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
VCAN-212ENST00000515397 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
VCAN-212ENST00000515397 LAMB4A4D0S4 1761 aa14.92□□□□□ -0.02
VCAN-212ENST00000515397 OLFM4Q6UX06 510 aa14.91□□□□□ -0.02
VCAN-212ENST00000515397 SYNE4Q8N205 404 aa14.91□□□□□ -0.02
VCAN-212ENST00000515397 PHAXQ9H814 394 aaKnown RBP14.91□□□□□ -0.02
VCAN-212ENST00000515397 RNF181Q9P0P0 153 aa14.91□□□□□ -0.02
VCAN-212ENST00000515397 BCORQ6W2J9 1755 aa14.9□□□□□ -0.02
VCAN-212ENST00000515397 ABCC12Q96J65 1359 aa14.9□□□□□ -0.02
VCAN-212ENST00000515397 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
VCAN-212ENST00000515397 MASTLQ96GX5 879 aa14.9□□□□□ -0.02
VCAN-212ENST00000515397 ANKRD31Q8N7Z5 1873 aa14.9□□□□□ -0.02
VCAN-212ENST00000515397 BRCA1P38398 1863 aaKnown RBP14.89□□□□□ -0.03
VCAN-212ENST00000515397 ATP5J2-PTCD1G3V325 749 aa14.89□□□□□ -0.03
VCAN-212ENST00000515397 NFKBIEO00221 500 aa14.89□□□□□ -0.03
VCAN-212ENST00000515397 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
VCAN-212ENST00000515397 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
VCAN-212ENST00000515397 SLC51AQ86UW1 340 aa14.89□□□□□ -0.03
VCAN-212ENST00000515397 GPBP1L1Q9HC44 474 aaPredicted RBP14.89□□□□□ -0.03
VCAN-212ENST00000515397 DBF4Q9UBU7 674 aaPredicted RBP14.89□□□□□ -0.03
VCAN-212ENST00000515397 ADCY9O60503 1353 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 RGL2O15211 777 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 NTSR2O95665 410 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 HOXB7P09629 217 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 NPR1P16066 1061 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 ANKRD13DQ6ZTN6 518 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 CNKSR1Q969H4 720 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 NYXQ9GZU5 481 aa14.88□□□□□ -0.03
VCAN-212ENST00000515397 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
VCAN-212ENST00000515397 KLRG2A4D1S0 409 aaPredicted RBP14.87□□□□□ -0.03
VCAN-212ENST00000515397 HCLS1P14317 486 aaPredicted RBP14.87□□□□□ -0.03
VCAN-212ENST00000515397 TCIRG1Q13488 830 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 RTL5Q5HYW3 569 aaPredicted RBP14.87□□□□□ -0.03
VCAN-212ENST00000515397 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 NLRP10Q86W26 655 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 UTP14AQ9BVJ6 771 aaKnown RBP14.87□□□□□ -0.03
VCAN-212ENST00000515397 HYPKQ9NX55 129 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 PDZRN3Q9UPQ7 1066 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 NUP98P52948 1817 aa14.87□□□□□ -0.03
VCAN-212ENST00000515397 PLBD2Q8NHP8 589 aa14.86□□□□□ -0.03
VCAN-212ENST00000515397 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
VCAN-212ENST00000515397 PARP10Q53GL7 1025 aa14.85□□□□□ -0.03
VCAN-212ENST00000515397 RIC3Q7Z5B4 369 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms