RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 TNFRSF10AO00220 468 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 PDGFAP04085 211 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 GTF2E1P29083 439 aaPredicted RBP6.57□□□□□ -1.36
HERC6-208ENST00000515365 TXLNAP40222 546 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 ZAP70P43403 619 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
HERC6-208ENST00000515365 MRPL58Q14197 206 aaKnown RBP6.57□□□□□ -1.36
HERC6-208ENST00000515365 GNASQ5JWF2 1037 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 EDEM1Q92611 657 aa6.57□□□□□ -1.36
HERC6-208ENST00000515365 LDHBP07195 334 aaKnown RBP6.56□□□□□ -1.36
HERC6-208ENST00000515365 USP5P45974 858 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 FGD1P98174 961 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 DNM1Q05193 864 aaKnown RBP6.56□□□□□ -1.36
HERC6-208ENST00000515365 C4orf17Q53FE4 359 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 SLC27A3Q5K4L6 730 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 TSEN34Q9BSV6 310 aaKnown RBP6.56□□□□□ -1.36
HERC6-208ENST00000515365 PLA2G2EQ9NZK7 142 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 BCS1LQ9Y276 419 aa6.56□□□□□ -1.36
HERC6-208ENST00000515365 SPINT1O43278 529 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
HERC6-208ENST00000515365 MAPK8P45983 427 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PLA2G4AP47712 749 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRR20EP86478 221 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRR20CP86479 221 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRR20DP86480 221 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRR20BP86481 221 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 PRR20AP86496 221 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 TREML1Q86YW5 311 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 HPS1Q92902 700 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
HERC6-208ENST00000515365 ZDHHC3Q9NYG2 299 aa6.55□□□□□ -1.36
HERC6-208ENST00000515365 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
HERC6-208ENST00000515365 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
HERC6-208ENST00000515365 TSNAXIP1Q2TAA8 658 aa6.54□□□□□ -1.36
HERC6-208ENST00000515365 RHPN1Q8TCX5 695 aa6.54□□□□□ -1.36
HERC6-208ENST00000515365 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
HERC6-208ENST00000515365 HIF1AQ16665 826 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 NBPF1Q3BBV0 1214 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 LINC00528Q8N1L1 170 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 GPR152Q8TDT2 470 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
HERC6-208ENST00000515365 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 PARP2Q9UGN5 583 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 WWC3Q9ULE0 1092 aa6.53□□□□□ -1.36
HERC6-208ENST00000515365 GPC6Q9Y625 555 aaPredicted RBP6.53□□□□□ -1.36
HERC6-208ENST00000515365 PNMA6FA0A0J9YX94 578 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 TGFBR3LH3BV60 316 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 MICAL2O94851 1124 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 PCSK2P16519 638 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 CTSOP43234 321 aaPredicted RBP6.52□□□□□ -1.37
HERC6-208ENST00000515365 ATP2B2Q01814 1243 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 XPCQ01831 940 aaPredicted RBP6.52□□□□□ -1.37
HERC6-208ENST00000515365 LDLRAD1Q5T700 205 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 IER5Q5VY09 327 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 TMC4Q7Z404 712 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
HERC6-208ENST00000515365 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 SETDB2Q96T68 719 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 POLMQ9NP87 494 aaPredicted RBP6.52□□□□□ -1.37
HERC6-208ENST00000515365 RNF19AQ9NV58 838 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 FAM13BQ9NYF5 915 aa6.52□□□□□ -1.37
HERC6-208ENST00000515365 DMGDHQ9UI17 866 aaKnown RBP6.52□□□□□ -1.37
HERC6-208ENST00000515365 CAPN5O15484 640 aaPredicted RBP6.51□□□□□ -1.37
HERC6-208ENST00000515365 DAB2P98082 770 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 ALG1LQ6GMV1 187 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 AIDAQ96BJ3 306 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 SUSD3Q96L08 255 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 FAM161BQ96MY7 647 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 GGNBP2Q9H3C7 697 aa6.51□□□□□ -1.37
HERC6-208ENST00000515365 OPLAHO14841 1288 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 UPP2O95045 317 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
HERC6-208ENST00000515365 TATP17735 454 aaPredicted RBP6.5□□□□□ -1.37
HERC6-208ENST00000515365 ATP4AP20648 1035 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 ITGAEP38570 1179 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 PHKA2P46019 1235 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 POU4F2Q12837 409 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 ORC1Q13415 861 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 WDR44Q5JSH3 913 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 NBPF10Q6P3W6 841 aaKnown RBP6.5□□□□□ -1.37
HERC6-208ENST00000515365 ZNF280CQ8ND82 737 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 RNF217Q8TC41 542 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 CSRNP1Q96S65 589 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 CFHR5Q9BXR6 569 aa6.5□□□□□ -1.37
HERC6-208ENST00000515365 ERCC6Q03468 1493 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 SCAMP3O14828 347 aaKnown RBP6.49□□□□□ -1.37
HERC6-208ENST00000515365 SORBS3O60504 671 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 PSMD2Q13200 908 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 FBF1Q8TES7 1133 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 PIK3R5Q8WYR1 880 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 HSH2DQ96JZ2 352 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 MRS2Q9HD23 443 aa6.49□□□□□ -1.37
HERC6-208ENST00000515365 A6NHS1 94 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 EIF1AYO14602 144 aaKnown RBP6.48□□□□□ -1.37
HERC6-208ENST00000515365 NEFLP07196 543 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 BMP2P12643 396 aa6.48□□□□□ -1.37
HERC6-208ENST00000515365 INPP5BP32019 993 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms