RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 PARP3Q9Y6F1 533 aa32.54■■■□□ 2.8
SPOCK3-224ENST00000515316 TM4SF1P30408 202 aa32.53■■■□□ 2.8
SPOCK3-224ENST00000515316 TTLL7Q6ZT98 887 aa32.52■■■□□ 2.8
SPOCK3-224ENST00000515316 COPS6Q7L5N1 327 aa32.52■■■□□ 2.8
SPOCK3-224ENST00000515316 STK31Q9BXU1 1019 aa32.52■■■□□ 2.8
SPOCK3-224ENST00000515316 MAP3K15Q6ZN16 1313 aa32.51■■■□□ 2.8
SPOCK3-224ENST00000515316 TRMT2AQ8IZ69 625 aaKnown RBP32.51■■■□□ 2.79
SPOCK3-224ENST00000515316 AIMP1Q12904 312 aaKnown RBP32.5■■■□□ 2.79
SPOCK3-224ENST00000515316 XAGE3Q8WTP9 111 aa32.5■■■□□ 2.79
SPOCK3-224ENST00000515316 NFIXQ14938 502 aa32.49■■■□□ 2.79
SPOCK3-224ENST00000515316 TBC1D9BQ66K14 1250 aa32.47■■■□□ 2.79
SPOCK3-224ENST00000515316 SETDB2Q96T68 719 aa32.47■■■□□ 2.79
SPOCK3-224ENST00000515316 HLFQ16534 295 aa32.46■■■□□ 2.79
SPOCK3-224ENST00000515316 BICDL1Q6ZP65 573 aa32.46■■■□□ 2.79
SPOCK3-224ENST00000515316 ZBTB3Q9H5J0 574 aa32.46■■■□□ 2.79
SPOCK3-224ENST00000515316 ZBED9Q6R2W3 1325 aa32.46■■■□□ 2.79
SPOCK3-224ENST00000515316 SCN7AQ01118 1682 aa32.45■■■□□ 2.79
SPOCK3-224ENST00000515316 POLRMTO00411 1230 aaKnown RBP32.44■■■□□ 2.78
SPOCK3-224ENST00000515316 SLC4A2P04920 1241 aa32.44■■■□□ 2.78
SPOCK3-224ENST00000515316 DDR1Q08345 913 aa32.44■■■□□ 2.78
SPOCK3-224ENST00000515316 GIGYF2Q6Y7W6 1299 aaKnown RBP32.43■■■□□ 2.78
SPOCK3-224ENST00000515316 ANKRD13DQ6ZTN6 518 aa32.43■■■□□ 2.78
SPOCK3-224ENST00000515316 FHDC1Q9C0D6 1143 aaPredicted RBP32.43■■■□□ 2.78
SPOCK3-224ENST00000515316 BCORQ6W2J9 1755 aa32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 TCERG1O14776 1098 aaKnown RBP32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 KLHL34Q8N239 644 aa32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 PLBD2Q8NHP8 589 aa32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 PHAXQ9H814 394 aaKnown RBP32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 CD2APQ9Y5K6 639 aa32.42■■■□□ 2.78
SPOCK3-224ENST00000515316 SERPINB2P05120 415 aa32.41■■■□□ 2.78
SPOCK3-224ENST00000515316 ZNF428Q96B54 188 aa32.41■■■□□ 2.78
SPOCK3-224ENST00000515316 NIP7Q9Y221 180 aaKnown RBP eCLIP32.41■■■□□ 2.78
SPOCK3-224ENST00000515316 DDX58O95786 925 aaKnown RBP32.4■■■□□ 2.78
SPOCK3-224ENST00000515316 HSP90AB3PQ58FF7 597 aa32.4■■■□□ 2.78
SPOCK3-224ENST00000515316 CT47B1P0C2W7 299 aaPredicted RBP32.39■■■□□ 2.78
SPOCK3-224ENST00000515316 SYT17Q9BSW7 474 aa32.39■■■□□ 2.78
SPOCK3-224ENST00000515316 CARMIL3Q8ND23 1372 aa32.39■■■□□ 2.78
SPOCK3-224ENST00000515316 SRCAPQ6ZRS2 3230 aa32.37■■■□□ 2.77
SPOCK3-224ENST00000515316 RIC3Q7Z5B4 369 aa32.37■■■□□ 2.77
SPOCK3-224ENST00000515316 ATP10DQ9P241 1426 aa32.35■■■□□ 2.77
SPOCK3-224ENST00000515316 TCIRG1Q13488 830 aa32.35■■■□□ 2.77
SPOCK3-224ENST00000515316 ZNF34Q8IZ26 560 aa32.35■■■□□ 2.77
SPOCK3-224ENST00000515316 NPHP1O15259 732 aa32.34■■■□□ 2.77
SPOCK3-224ENST00000515316 TPTE2Q6XPS3 522 aa32.34■■■□□ 2.77
SPOCK3-224ENST00000515316 NBPF5PQ86XG9 351 aaPredicted RBP32.34■■■□□ 2.77
SPOCK3-224ENST00000515316 NUP98P52948 1817 aa32.33■■■□□ 2.77
SPOCK3-224ENST00000515316 PARP10Q53GL7 1025 aa32.33■■■□□ 2.77
SPOCK3-224ENST00000515316 GPTP24298 496 aa32.32■■■□□ 2.76
SPOCK3-224ENST00000515316 FLIIQ13045 1269 aa32.32■■■□□ 2.76
SPOCK3-224ENST00000515316 G2E3Q7L622 706 aa32.32■■■□□ 2.76
SPOCK3-224ENST00000515316 CACNA1FO60840 1977 aa32.31■■■□□ 2.76
SPOCK3-224ENST00000515316 KSR2Q6VAB6 950 aa32.31■■■□□ 2.76
SPOCK3-224ENST00000515316 CNBD1Q8NA66 436 aa32.31■■■□□ 2.76
SPOCK3-224ENST00000515316 NYXQ9GZU5 481 aa32.31■■■□□ 2.76
SPOCK3-224ENST00000515316 TGFB2P61812 414 aa32.3■■■□□ 2.76
SPOCK3-224ENST00000515316 ALDH1L2Q3SY69 923 aa32.3■■■□□ 2.76
SPOCK3-224ENST00000515316 PPP1R42Q7Z4L9 355 aa32.3■■■□□ 2.76
SPOCK3-224ENST00000515316 C10orf71Q711Q0 1435 aa32.29■■■□□ 2.76
SPOCK3-224ENST00000515316 ST5P78524 1137 aa32.29■■■□□ 2.76
SPOCK3-224ENST00000515316 PRR5LQ6MZQ0 368 aa32.29■■■□□ 2.76
SPOCK3-224ENST00000515316 FAM177BA6PVY3 158 aa32.28■■■□□ 2.76
SPOCK3-224ENST00000515316 GTF2E1P29083 439 aaPredicted RBP32.28■■■□□ 2.76
SPOCK3-224ENST00000515316 FKBP5Q13451 457 aaPredicted RBP32.28■■■□□ 2.76
SPOCK3-224ENST00000515316 PI4KAP2A4QPH2 592 aa32.27■■■□□ 2.76
SPOCK3-224ENST00000515316 PI4KAP1Q8N8J0 262 aa32.27■■■□□ 2.76
SPOCK3-224ENST00000515316 NRXN2Q9P2S2 1712 aa32.26■■■□□ 2.76
SPOCK3-224ENST00000515316 SUSD4Q5VX71 490 aa32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 MRPL50Q8N5N7 158 aaKnown RBP32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 NLGN2Q8NFZ4 835 aa32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 SSH1Q8WYL5 1049 aa32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 METTL22Q9BUU2 404 aaPredicted RBP32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 MAP3K2Q9Y2U5 619 aa32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 AFDNP55196 1824 aaKnown RBP32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 UBN2Q6ZU65 1347 aa32.26■■■□□ 2.75
SPOCK3-224ENST00000515316 TRIM28Q13263 835 aaKnown RBP32.25■■■□□ 2.75
SPOCK3-224ENST00000515316 NLRP10Q86W26 655 aa32.25■■■□□ 2.75
SPOCK3-224ENST00000515316 ISCA1Q9BUE6 129 aa32.25■■■□□ 2.75
SPOCK3-224ENST00000515316 BRIP1Q9BX63 1249 aa32.25■■■□□ 2.75
SPOCK3-224ENST00000515316 UTP14AQ9BVJ6 771 aaKnown RBP32.24■■■□□ 2.75
SPOCK3-224ENST00000515316 PDZRN3Q9UPQ7 1066 aa32.24■■■□□ 2.75
SPOCK3-224ENST00000515316 IBTKQ9P2D0 1353 aaPredicted RBP32.23■■■□□ 2.75
SPOCK3-224ENST00000515316 PDE6BP35913 854 aa32.23■■■□□ 2.75
SPOCK3-224ENST00000515316 NEXNQ0ZGT2 675 aa32.23■■■□□ 2.75
SPOCK3-224ENST00000515316 MYD88Q99836 296 aa32.23■■■□□ 2.75
SPOCK3-224ENST00000515316 ATP5J2-PTCD1G3V325 749 aa32.22■■■□□ 2.75
SPOCK3-224ENST00000515316 SMC4Q9NTJ3 1288 aa32.22■■■□□ 2.75
SPOCK3-224ENST00000515316 KIF13BQ9NQT8 1826 aa32.21■■■□□ 2.75
SPOCK3-224ENST00000515316 RNF123Q5XPI4 1314 aa32.21■■■□□ 2.75
SPOCK3-224ENST00000515316 ADCY9O60503 1353 aa32.2■■■□□ 2.75
SPOCK3-224ENST00000515316 DCAF8L1A6NGE4 600 aa32.2■■■□□ 2.75
SPOCK3-224ENST00000515316 NTSR2O95665 410 aa32.2■■■□□ 2.75
SPOCK3-224ENST00000515316 CCDC24Q8N4L8 307 aa32.2■■■□□ 2.75
SPOCK3-224ENST00000515316 DNAAF4Q8WXU2 420 aa32.2■■■□□ 2.75
SPOCK3-224ENST00000515316 A0A0G2JLW4 131 aa32.19■■■□□ 2.74
SPOCK3-224ENST00000515316 RARSP54136 660 aaKnown RBP32.19■■■□□ 2.74
SPOCK3-224ENST00000515316 TRMT112Q9UI30 125 aaKnown RBP32.19■■■□□ 2.74
SPOCK3-224ENST00000515316 ARFGEF2Q9Y6D5 1785 aa32.19■■■□□ 2.74
SPOCK3-224ENST00000515316 ANKRD36CQ5JPF3 1778 aa32.18■■■□□ 2.74
SPOCK3-224ENST00000515316 DPEP1P16444 411 aa32.18■■■□□ 2.74
SPOCK3-224ENST00000515316 NUTM1Q86Y26 1132 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms