RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
RAPGEF6-214ENST00000515170 HSP90AB3PQ58FF7 597 aa11.85□□□□□ -0.51
RAPGEF6-214ENST00000515170 BLOC1S2Q6QNY1 142 aa11.85□□□□□ -0.51
RAPGEF6-214ENST00000515170 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF6-214ENST00000515170 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 PHKG2P15735 406 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 GLI2P10070 1586 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 HAND2P61296 217 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
RAPGEF6-214ENST00000515170 MADDQ8WXG6 1647 aa11.83□□□□□ -0.51
RAPGEF6-214ENST00000515170 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 NUCB2P80303 420 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 GSE1Q14687 1217 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 NDUFB9Q9Y6M9 179 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 NUP133Q8WUM0 1156 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 JAG2Q9Y219 1238 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 ADGRB3O60242 1522 aa11.83□□□□□ -0.52
RAPGEF6-214ENST00000515170 SYNMO15061 1565 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 GNPATO15228 680 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 ERBB3P21860 1342 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 USP21Q9UK80 565 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 ATP7BP35670 1465 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 ALDH1L1O75891 902 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 TIMM10P62072 90 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 PDRG1Q9NUG6 133 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 ASAP1Q9ULH1 1129 aa11.82□□□□□ -0.52
RAPGEF6-214ENST00000515170 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 DTNBO60941 627 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 IKQ13123 557 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 C8orf34Q49A92 452 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 BRPF3Q9ULD4 1205 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
RAPGEF6-214ENST00000515170 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 CAVIN4Q5BKX8 364 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 TFCP2Q12800 502 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 NACAP1Q9BZK3 213 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 PTMSP20962 102 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 CAVIN1Q6NZI2 390 aaKnown RBP11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
RAPGEF6-214ENST00000515170 PLEKHM2Q8IWE5 1019 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.527e-7■■■□□ 14.6
RAPGEF6-214ENST00000515170 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 MSNP26038 577 aaKnown RBP11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 CAMSAP1Q5T5Y3 1602 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 CCNL1Q9UK58 526 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF6-214ENST00000515170 TRAK2O60296 914 aa11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 SLC5A1P13866 664 aa11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 PES1O00541 588 aaKnown RBP11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 LARP1BQ659C4 914 aaKnown RBP11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF6-214ENST00000515170 GUCY1B3Q02153 619 aa11.77□□□□□ -0.52
RAPGEF6-214ENST00000515170 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.52
RAPGEF6-214ENST00000515170 EVI5LQ96CN4 794 aa11.77□□□□□ -0.52
RAPGEF6-214ENST00000515170 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.52
RAPGEF6-214ENST00000515170 RNF123Q5XPI4 1314 aa11.77□□□□□ -0.52
RAPGEF6-214ENST00000515170 ZSCAN25Q6NSZ9 544 aa11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 SAFBQ15424 915 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 NLRP3Q96P20 1036 aa11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 NAPBQ9H115 298 aa11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 LMTK2Q8IWU2 1503 aa11.77□□□□□ -0.53
RAPGEF6-214ENST00000515170 TULP4Q9NRJ4 1543 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms