RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
SMAD5-209ENST00000514777 VEGFBP49765 207 aa17.74■□□□□ 0.43
SMAD5-209ENST00000514777 CNBD1Q8NA66 436 aa17.74■□□□□ 0.43
SMAD5-209ENST00000514777 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
SMAD5-209ENST00000514777 PER1O15534 1290 aaPredicted RBP17.73■□□□□ 0.43
SMAD5-209ENST00000514777 KCNQ3O43525 872 aa17.73■□□□□ 0.43
SMAD5-209ENST00000514777 LDHDQ86WU2 507 aa17.73■□□□□ 0.43
SMAD5-209ENST00000514777 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
SMAD5-209ENST00000514777 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
SMAD5-209ENST00000514777 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 TEFQ10587 303 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 WBP1LQ9NX94 342 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 USP16Q9Y5T5 823 aa17.71■□□□□ 0.43
SMAD5-209ENST00000514777 TMEM88BA6NKF7 163 aa17.7■□□□□ 0.42
SMAD5-209ENST00000514777 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
SMAD5-209ENST00000514777 ST5P78524 1137 aa17.7■□□□□ 0.42
SMAD5-209ENST00000514777 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
SMAD5-209ENST00000514777 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
SMAD5-209ENST00000514777 FMNL2Q96PY5 1086 aa17.7■□□□□ 0.42
SMAD5-209ENST00000514777 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
SMAD5-209ENST00000514777 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
SMAD5-209ENST00000514777 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
SMAD5-209ENST00000514777 CTCFP49711 727 aaPredicted RBP17.69■□□□□ 0.42
SMAD5-209ENST00000514777 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
SMAD5-209ENST00000514777 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
SMAD5-209ENST00000514777 LBX1P52954 281 aa17.68■□□□□ 0.42
SMAD5-209ENST00000514777 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMAD5-209ENST00000514777 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
SMAD5-209ENST00000514777 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
SMAD5-209ENST00000514777 NPHP1O15259 732 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 NPR1P16066 1061 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
SMAD5-209ENST00000514777 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
SMAD5-209ENST00000514777 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
SMAD5-209ENST00000514777 EPHX2P34913 555 aa17.66■□□□□ 0.42
SMAD5-209ENST00000514777 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
SMAD5-209ENST00000514777 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
SMAD5-209ENST00000514777 HACL1Q9UJ83 578 aa17.66■□□□□ 0.42
SMAD5-209ENST00000514777 RASSF10A6NK89 507 aa17.65■□□□□ 0.42
SMAD5-209ENST00000514777 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
SMAD5-209ENST00000514777 FZD9O00144 591 aa17.65■□□□□ 0.42
SMAD5-209ENST00000514777 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
SMAD5-209ENST00000514777 MAP1SQ66K74 1059 aaPredicted RBP17.65■□□□□ 0.42
SMAD5-209ENST00000514777 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
SMAD5-209ENST00000514777 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
SMAD5-209ENST00000514777 HSPA8P11142 646 aaKnown RBP17.64■□□□□ 0.41
SMAD5-209ENST00000514777 DEFB115Q30KQ5 88 aa17.64■□□□□ 0.41
SMAD5-209ENST00000514777 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
SMAD5-209ENST00000514777 CNTROBQ8N137 903 aa17.64■□□□□ 0.41
SMAD5-209ENST00000514777 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
SMAD5-209ENST00000514777 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
SMAD5-209ENST00000514777 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
SMAD5-209ENST00000514777 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
SMAD5-209ENST00000514777 RNF123Q5XPI4 1314 aa17.63■□□□□ 0.41
SMAD5-209ENST00000514777 SNED1Q8TER0 1413 aa17.63■□□□□ 0.41
SMAD5-209ENST00000514777 LTBP1Q14766 1721 aa17.62■□□□□ 0.41
SMAD5-209ENST00000514777 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
SMAD5-209ENST00000514777 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
SMAD5-209ENST00000514777 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
SMAD5-209ENST00000514777 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
SMAD5-209ENST00000514777 COL4A5P29400 1685 aa17.61■□□□□ 0.41
SMAD5-209ENST00000514777 HLFQ16534 295 aa17.61■□□□□ 0.41
SMAD5-209ENST00000514777 PNMA8AQ86V59 439 aaPredicted RBP17.61■□□□□ 0.41
SMAD5-209ENST00000514777 ABHD8Q96I13 439 aa17.61■□□□□ 0.41
SMAD5-209ENST00000514777 NIP7Q9Y221 180 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMAD5-209ENST00000514777 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
SMAD5-209ENST00000514777 SLC34A2O95436 690 aa17.6■□□□□ 0.41
SMAD5-209ENST00000514777 FMR1Q06787 632 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMAD5-209ENST00000514777 GPC2Q8N158 579 aa17.6■□□□□ 0.41
SMAD5-209ENST00000514777 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
SMAD5-209ENST00000514777 TRPM7Q96QT4 1865 aa17.59■□□□□ 0.41
SMAD5-209ENST00000514777 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
SMAD5-209ENST00000514777 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
SMAD5-209ENST00000514777 NUP98P52948 1817 aa17.58■□□□□ 0.41
SMAD5-209ENST00000514777 RGL2O15211 777 aa17.58■□□□□ 0.4
SMAD5-209ENST00000514777 ALDH1B1P30837 517 aa17.58■□□□□ 0.4
SMAD5-209ENST00000514777 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
SMAD5-209ENST00000514777 DDX21Q9NR30 783 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMAD5-209ENST00000514777 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
SMAD5-209ENST00000514777 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
SMAD5-209ENST00000514777 MCM10Q7L590 875 aa17.57■□□□□ 0.4
SMAD5-209ENST00000514777 PSMD1Q99460 953 aa17.57■□□□□ 0.4
SMAD5-209ENST00000514777 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
SMAD5-209ENST00000514777 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
SMAD5-209ENST00000514777 CRY2Q49AN0 593 aa17.56■□□□□ 0.4
SMAD5-209ENST00000514777 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
SMAD5-209ENST00000514777 ABT1Q9ULW3 272 aaKnown RBP17.56■□□□□ 0.4
SMAD5-209ENST00000514777 THSD7BQ9C0I4 1608 aa17.56■□□□□ 0.4
SMAD5-209ENST00000514777 EPS15P42566 896 aa17.55■□□□□ 0.4
SMAD5-209ENST00000514777 SCNN1DP51172 638 aa17.55■□□□□ 0.4
SMAD5-209ENST00000514777 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
SMAD5-209ENST00000514777 CST9Q5W186 159 aa17.55■□□□□ 0.4
SMAD5-209ENST00000514777 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
SMAD5-209ENST00000514777 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
SMAD5-209ENST00000514777 GJA3Q9Y6H8 435 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms