RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
USP46-209ENST00000514536 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
USP46-209ENST00000514536 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
USP46-209ENST00000514536 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
USP46-209ENST00000514536 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
USP46-209ENST00000514536 SERPINB2P05120 415 aa18.02■□□□□ 0.48
USP46-209ENST00000514536 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.48
USP46-209ENST00000514536 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
USP46-209ENST00000514536 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
USP46-209ENST00000514536 ZBTB3Q9H5J0 574 aa18.02■□□□□ 0.48
USP46-209ENST00000514536 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
USP46-209ENST00000514536 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.47
USP46-209ENST00000514536 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
USP46-209ENST00000514536 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
USP46-209ENST00000514536 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
USP46-209ENST00000514536 UTRNP46939 3433 aa18.01■□□□□ 0.47
USP46-209ENST00000514536 CCDC30Q5VVM6 783 aa18■□□□□ 0.47
USP46-209ENST00000514536 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
USP46-209ENST00000514536 CHMP4AQ9BY43 222 aa18■□□□□ 0.47
USP46-209ENST00000514536 HYPKQ9NX55 129 aa18■□□□□ 0.47
USP46-209ENST00000514536 RGL2O15211 777 aa17.99■□□□□ 0.47
USP46-209ENST00000514536 NIP7Q9Y221 180 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP46-209ENST00000514536 E9PSI1 815 aa17.98■□□□□ 0.47
USP46-209ENST00000514536 VAMP4O75379 141 aa17.98■□□□□ 0.47
USP46-209ENST00000514536 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
USP46-209ENST00000514536 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
USP46-209ENST00000514536 GIGYF2Q6Y7W6 1299 aaKnown RBP17.97■□□□□ 0.47
USP46-209ENST00000514536 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
USP46-209ENST00000514536 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
USP46-209ENST00000514536 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
USP46-209ENST00000514536 A0A0G2JLW4 131 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 FAM177BA6PVY3 158 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 GPTP24298 496 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.46
USP46-209ENST00000514536 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 CCDC24Q8N4L8 307 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 STK31Q9BXU1 1019 aa17.96■□□□□ 0.46
USP46-209ENST00000514536 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
USP46-209ENST00000514536 NPHP1O15259 732 aa17.95■□□□□ 0.46
USP46-209ENST00000514536 TGFB2P61812 414 aa17.95■□□□□ 0.46
USP46-209ENST00000514536 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
USP46-209ENST00000514536 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 PELP1Q8IZL8 1130 aaKnown RBP17.94■□□□□ 0.46
USP46-209ENST00000514536 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
USP46-209ENST00000514536 DPEP1P16444 411 aa17.93■□□□□ 0.46
USP46-209ENST00000514536 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
USP46-209ENST00000514536 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
USP46-209ENST00000514536 GPR162Q16538 588 aa17.92■□□□□ 0.46
USP46-209ENST00000514536 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
USP46-209ENST00000514536 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 TRMT2AQ8IZ69 625 aaKnown RBP17.91■□□□□ 0.46
USP46-209ENST00000514536 ZNF784Q8NCA9 323 aaPredicted RBP17.91■□□□□ 0.46
USP46-209ENST00000514536 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 UBN2Q6ZU65 1347 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 GTF2E1P29083 439 aaPredicted RBP17.91■□□□□ 0.46
USP46-209ENST00000514536 CHRNA5P30532 468 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 ST5P78524 1137 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 G2E3Q7L622 706 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
USP46-209ENST00000514536 PXDNLA1KZ92 1463 aa17.9■□□□□ 0.46
USP46-209ENST00000514536 KCNA3P22001 575 aa17.9■□□□□ 0.46
USP46-209ENST00000514536 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
USP46-209ENST00000514536 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
USP46-209ENST00000514536 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
USP46-209ENST00000514536 YBX3P16989 372 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP46-209ENST00000514536 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
USP46-209ENST00000514536 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
USP46-209ENST00000514536 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
USP46-209ENST00000514536 C2CD5Q86YS7 1000 aa17.88■□□□□ 0.45
USP46-209ENST00000514536 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
USP46-209ENST00000514536 H0YIN7 160 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 PDE6BP35913 854 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 ZNF428Q96B54 188 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
USP46-209ENST00000514536 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 GOLGB1Q14789 3259 aaKnown RBP17.87■□□□□ 0.45
USP46-209ENST00000514536 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 NTSR2O95665 410 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 FLIIQ13045 1269 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 PIM2Q9P1W9 311 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 NUP98P52948 1817 aa17.87■□□□□ 0.45
USP46-209ENST00000514536 MYD88Q99836 296 aa17.86■□□□□ 0.45
USP46-209ENST00000514536 BCS1LQ9Y276 419 aa17.86■□□□□ 0.45
USP46-209ENST00000514536 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
USP46-209ENST00000514536 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
USP46-209ENST00000514536 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
USP46-209ENST00000514536 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.45
USP46-209ENST00000514536 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms