RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	CBLB	Q13191	982 aa		7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	KDF1	Q8NAX2	398 aa	Predicted RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	UBXN4	Q92575	508 aa		7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	EMID1	Q96A84	441 aa	Predicted RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	NIFK	Q9BYG3	293 aa	Known RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	METTL5	Q9NRN9	209 aa	Known RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.73	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	SLC19A1	P41440	591 aa		7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	TMEM214	Q6NUQ4	689 aa	Known RBP	7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006		Q6ZVU0	165 aa		7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	ZNF295-AS1	Q8N0V1	137 aa		7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	TTC16	Q8NEE8	873 aa		7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	RNF34	Q969K3	372 aa		7.72	□□□□□ -1.17
CALCOCO2-222	ENST00000514006	GNA15	P30679	374 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	C1orf53	Q5VUE5	145 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	METTL16	Q86W50	562 aa	Known RBP	7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	NT5DC4	Q86YG4	428 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TREML1	Q86YW5	311 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	RHBDD1	Q8TEB9	315 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FBF1	Q8TES7	1133 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	PIK3R5	Q8WYR1	880 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CSRNP1	Q96S65	589 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FAM13B	Q9NYF5	915 aa		7.71	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ZIC2	O95409	532 aa	Predicted RBP	7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	NEFL	P07196	543 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ZNF76	P36508	570 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FANCC	Q00597	558 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	RELB	Q01201	579 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	RAD51AP2	Q09MP3	1159 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	C8orf34	Q49A92	452 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	GPR152	Q8TDT2	470 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	NUDT16	Q96DE0	195 aa	Known RBP	7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ITPKC	Q96DU7	683 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	AGBL1	Q96MI9	1066 aa		7.7	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	RPLP1	P05386	114 aa	Known RBP	7.69	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FRMD6	Q96NE9	622 aa		7.69	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ORC1	Q13415	861 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	HIF1A	Q16665	826 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	GNAS	Q5JWF2	1037 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TGIF2	Q9GZN2	237 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	DNAJC25	Q9H1X3	360 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CCSER2	Q9H7U1	834 aa		7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.68	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	EIF1AY	O14602	144 aa	Known RBP	7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TXLNA	P40222	546 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	PLA2G4A	P47712	749 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	WDR4	P57081	412 aa	Known RBP	7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	SLC27A3	Q5K4L6	730 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	SPRYD7	Q5W111	196 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	SNIP1	Q8TAD8	396 aa	Known RBP	7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	RHPN1	Q8TCX5	695 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CFHR5	Q9BXR6	569 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	GGNBP2	Q9H3C7	697 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ZFAND3	Q9H8U3	227 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	SPG7	Q9UQ90	795 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	AK5	Q9Y6K8	562 aa		7.67	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	MICAL2	O94851	1124 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	HMGB1	P09429	215 aa	Known RBP	7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FOXC1	Q12948	553 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	NBPF1	Q3BBV0	1214 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	ZNF697	Q5TEC3	545 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CRELD1	Q96HD1	420 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	KLF16	Q9BXK1	252 aa	Predicted RBP	7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	BCS1L	Q9Y276	419 aa		7.66	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TGFBR3L	H3BV60	316 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CPNE3	O75131	537 aa	Known RBP	7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	GPC1	P35052	558 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	FAM177A1	Q8N128	213 aa	Predicted RBP	7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	AIDA	Q96BJ3	306 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TINF2	Q9BSI4	451 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	TANGO6	Q9C0B7	1094 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006	CAPN10	Q9HC96	672 aa		7.65	□□□□□ -1.18
CALCOCO2-222	ENST00000514006		A6NHS1	94 aa		7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TIMP2	P16035	220 aa		7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	EIF4B	P23588	611 aa	Known RBP	7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	GNL2	Q13823	731 aa	Known RBP	7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	C4orf17	Q53FE4	359 aa		7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ZNF598	Q86UK7	904 aa	Known RBP	7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	GRIP2	Q9C0E4	1043 aa		7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ZDHHC3	Q9NYG2	299 aa		7.64	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	CTSH	P09668	335 aa		7.63	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	SLC43A3	Q8NBI5	491 aa		7.63	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ACBD3	Q9H3P7	528 aa		7.63	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TTC24	A2A3L6	582 aa	Predicted RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	OPLAH	O14841	1288 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	TAT	P17735	454 aa	Predicted RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	IDH3A	P50213	366 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	RNF144A	P50876	292 aa	Predicted RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	IER5	Q5VY09	327 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	SUSD3	Q96L08	255 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	PUS7	Q96PZ0	661 aa	Known RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	PKD2L1	Q9P0L9	805 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	ANKIB1	Q9P2G1	1089 aa		7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006	GPC6	Q9Y625	555 aa	Predicted RBP	7.62	□□□□□ -1.19
CALCOCO2-222	ENST00000514006		J3QL48	77 aa		7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms