RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 ST5P78524 1137 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 GIGYF2Q6Y7W6 1299 aaKnown RBP9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 PPP1R42Q7Z4L9 355 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 PLBD2Q8NHP8 589 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 TPTE2Q6XPS3 522 aa9.15□□□□□ -0.94
RAPGEF2-212ENST00000513816 SLFN5Q08AF3 891 aa9.15□□□□□ -0.94
RAPGEF2-212ENST00000513816 SRP68Q9UHB9 627 aaKnown RBP9.15□□□□□ -0.94
RAPGEF2-212ENST00000513816 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 PDE6BP35913 854 aa9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 FKBP8Q14318 412 aa9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 NFIXQ14938 502 aa9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 MSL1Q68DK7 614 aa9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 TBC1D2BQ9UPU7 963 aa9.15□□□□□ -0.95
RAPGEF2-212ENST00000513816 SERPINB2P05120 415 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 ZBED9Q6R2W3 1325 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 ANKRD36CQ5JPF3 1778 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 PRAMEF22A3QJZ6 481 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 NPHP1O15259 732 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 GRIN3BO60391 1043 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 TRIM28Q13263 835 aaKnown RBP9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 PDIA6Q15084 440 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 ALDH1L2Q3SY69 923 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 SYT17Q9BSW7 474 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 EP400Q96L91 3159 aa9.14□□□□□ -0.95
RAPGEF2-212ENST00000513816 MYL6BP14649 208 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 ANKRD13DQ6ZTN6 518 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 AMIGO3Q86WK7 504 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 CNBD1Q8NA66 436 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 C8orf58Q8NAV2 365 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 EXOSC9Q06265 439 aaKnown RBP9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 XAGE3Q8WTP9 111 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 PXDNLA1KZ92 1463 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 COPS6Q7L5N1 327 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 LRP10Q7Z4F1 713 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 TSR2Q969E8 191 aaKnown RBP9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 NIP7Q9Y221 180 aaKnown RBP eCLIP9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 NUP98P52948 1817 aa9.13□□□□□ -0.95
RAPGEF2-212ENST00000513816 VAMP4O75379 141 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 NBPF5PQ86XG9 351 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 SALL2Q9Y467 1007 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 ZNF34Q8IZ26 560 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 DDR1Q08345 913 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
RAPGEF2-212ENST00000513816 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 TBC1D9BQ66K14 1250 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 PTPRCP08575 1304 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 AFDNP55196 1824 aaKnown RBP9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 H0YIN7 160 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 TTLL7Q6ZT98 887 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 CCDC191Q8NCU4 936 aa9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
RAPGEF2-212ENST00000513816 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 HDAC5Q9UQL6 1122 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 KRT24Q2M2I5 525 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 STYK1Q6J9G0 422 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 KLHL34Q8N239 644 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 ZBTB3Q9H5J0 574 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 METTL22Q9BUU2 404 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 PIM2Q9P1W9 311 aa9.1□□□□□ -0.95
RAPGEF2-212ENST00000513816 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 SLC4A2P04920 1241 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 SLC10A5Q5PT55 438 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 FLIIQ13045 1269 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 TSPYL6Q8N831 410 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 NECTIN2Q92692 538 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 SH3TC1Q8TE82 1336 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 KLRG2A4D1S0 409 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 ALDH1B1P30837 517 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
RAPGEF2-212ENST00000513816 IPO8O15397 1037 aaKnown RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 NPR1P16066 1061 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 SMIM5Q71RC9 77 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 MASTLQ96GX5 879 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 CWC25Q9NXE8 425 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 PIP4K2AP48426 406 aaPredicted RBP9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 HLFQ16534 295 aa9.08□□□□□ -0.96
RAPGEF2-212ENST00000513816 NLRP10Q86W26 655 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms