RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 ALDH16A1Q8IZ83 802 aa11.79□□□□□ -0.52
TRAPPC11-210ENST00000513600 BNIP3LO60238 219 aa11.78□□□□□ -0.52
TRAPPC11-210ENST00000513600 LORP23490 312 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC11-210ENST00000513600 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
TRAPPC11-210ENST00000513600 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
TRAPPC11-210ENST00000513600 ABHD17AQ96GS6 310 aa11.78□□□□□ -0.52
TRAPPC11-210ENST00000513600 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
TRAPPC11-210ENST00000513600 ANKIB1Q9P2G1 1089 aa11.77□□□□□ -0.53
TRAPPC11-210ENST00000513600 STK17AQ9UEE5 414 aa11.77□□□□□ -0.53
TRAPPC11-210ENST00000513600 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 HIF1AQ16665 826 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 LRRC69Q6ZNQ3 347 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 IGF1RP08069 1367 aa11.76□□□□□ -0.53
TRAPPC11-210ENST00000513600 FGFR3P22607 806 aa11.75□□□□□ -0.53
TRAPPC11-210ENST00000513600 MAP2K3P46734 347 aa11.75□□□□□ -0.53
TRAPPC11-210ENST00000513600 TNP2Q05952 138 aa11.75□□□□□ -0.53
TRAPPC11-210ENST00000513600 PRIMPOLQ96LW4 560 aa11.75□□□□□ -0.53
TRAPPC11-210ENST00000513600 FAM181BA6NEQ2 426 aa11.74□□□□□ -0.53
TRAPPC11-210ENST00000513600 KHNYNO15037 678 aaKnown RBP11.74□□□□□ -0.53
TRAPPC11-210ENST00000513600 MAPTP10636 758 aaKnown RBP11.74□□□□□ -0.53
TRAPPC11-210ENST00000513600 RTN1Q16799 776 aa11.74□□□□□ -0.53
TRAPPC11-210ENST00000513600 PRMT3O60678 531 aa11.73□□□□□ -0.53
TRAPPC11-210ENST00000513600 LAMC2Q13753 1193 aa11.73□□□□□ -0.53
TRAPPC11-210ENST00000513600 OCLNQ16625 522 aa11.73□□□□□ -0.53
TRAPPC11-210ENST00000513600 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
TRAPPC11-210ENST00000513600 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
TRAPPC11-210ENST00000513600 DCDC2BA2VCK2 349 aa11.72□□□□□ -0.53
TRAPPC11-210ENST00000513600 BMP4P12644 408 aa11.71□□□□□ -0.53
TRAPPC11-210ENST00000513600 KLRG1Q96E93 195 aa11.71□□□□□ -0.53
TRAPPC11-210ENST00000513600 EFSO43281 561 aa11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 CTBSQ01459 385 aa11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 FAM182BQ5T319 152 aa11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 ZNF385CQ66K41 422 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 HSH2DQ96JZ2 352 aa11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 ARID3AQ99856 593 aa11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 CXXC1Q9P0U4 656 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC11-210ENST00000513600 SVOPQ8N4V2 548 aa11.69□□□□□ -0.54
TRAPPC11-210ENST00000513600 MARK1Q9P0L2 795 aa11.69□□□□□ -0.54
TRAPPC11-210ENST00000513600 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
TRAPPC11-210ENST00000513600 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
TRAPPC11-210ENST00000513600 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
TRAPPC11-210ENST00000513600 CEP63Q96MT8 703 aa11.68□□□□□ -0.54
TRAPPC11-210ENST00000513600 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
TRAPPC11-210ENST00000513600 C2CD2LO14523 706 aa11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 CD33P20138 364 aa11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 MAP3K10Q02779 954 aa11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 COL26A1Q96A83 441 aa11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 MYO19Q96H55 970 aa11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC11-210ENST00000513600 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
TRAPPC11-210ENST00000513600 CELA2BP08218 269 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC11-210ENST00000513600 IER5Q5VY09 327 aa11.66□□□□□ -0.54
TRAPPC11-210ENST00000513600 ACDQ96AP0 544 aa11.66□□□□□ -0.54
TRAPPC11-210ENST00000513600 LRRC4BQ9NT99 713 aa11.66□□□□□ -0.54
TRAPPC11-210ENST00000513600 BRD7Q9NPI1 651 aa11.65□□□□□ -0.54
TRAPPC11-210ENST00000513600 STRN4Q9NRL3 753 aa11.65□□□□□ -0.54
TRAPPC11-210ENST00000513600 GDF2Q9UK05 429 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC11-210ENST00000513600 HCN2Q9UL51 889 aa11.65□□□□□ -0.54
TRAPPC11-210ENST00000513600 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 BCRP11274 1271 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 TYRO3Q06418 890 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 DGKZQ13574 1117 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 C11orf91Q3C1V1 193 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 BTLAQ7Z6A9 289 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 ENAMQ9NRM1 1142 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 KLK14Q9P0G3 267 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
TRAPPC11-210ENST00000513600 ARAFP10398 606 aa11.63□□□□□ -0.55
TRAPPC11-210ENST00000513600 KCNQ4P56696 695 aa11.63□□□□□ -0.55
TRAPPC11-210ENST00000513600 GOLGA6L1Q8N7Z2 621 aa11.63□□□□□ -0.55
TRAPPC11-210ENST00000513600 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
TRAPPC11-210ENST00000513600 SFSWAPQ12872 951 aaKnown RBP11.62□□□□□ -0.55
TRAPPC11-210ENST00000513600 AVENQ9NQS1 362 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC11-210ENST00000513600 PRR12Q9ULL5 1215 aa11.62□□□□□ -0.55
TRAPPC11-210ENST00000513600 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
TRAPPC11-210ENST00000513600 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
TRAPPC11-210ENST00000513600 KCNH4Q9UQ05 1017 aa11.61□□□□□ -0.55
TRAPPC11-210ENST00000513600 OIP5O43482 229 aa11.6□□□□□ -0.55
TRAPPC11-210ENST00000513600 COX20Q5RI15 118 aa11.6□□□□□ -0.55
TRAPPC11-210ENST00000513600 C16orf46Q6P387 395 aa11.6□□□□□ -0.55
TRAPPC11-210ENST00000513600 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
TRAPPC11-210ENST00000513600 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
TRAPPC11-210ENST00000513600 ZNF468Q5VIY5 522 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC11-210ENST00000513600 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
TRAPPC11-210ENST00000513600 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
TRAPPC11-210ENST00000513600 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
TRAPPC11-210ENST00000513600 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
TRAPPC11-210ENST00000513600 ADH6P28332 368 aa11.58□□□□□ -0.56
TRAPPC11-210ENST00000513600 SLCO4C1Q6ZQN7 724 aa11.58□□□□□ -0.56
TRAPPC11-210ENST00000513600 MICAL2O94851 1124 aa11.57□□□□□ -0.56
TRAPPC11-210ENST00000513600 EPB42P16452 691 aa11.57□□□□□ -0.56
TRAPPC11-210ENST00000513600 GALNT6Q8NCL4 622 aa11.57□□□□□ -0.56
TRAPPC11-210ENST00000513600 SAP130Q9H0E3 1048 aa11.57□□□□□ -0.56
TRAPPC11-210ENST00000513600 DNMT3AQ9Y6K1 912 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms