RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 BCRP11274 1271 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 NOS2P35228 1153 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 TXLNAP40222 546 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 SEC13P55735 322 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 LRRC69Q6ZNQ3 347 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 NBPF11Q86T75 865 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 FNBP4Q8N3X1 1017 aaPredicted RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 SCG3Q8WXD2 468 aaKnown RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 CFHR5Q9BXR6 569 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 OXCT2Q9BYC2 517 aaPredicted RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 ZCCHC2Q9C0B9 1178 aaKnown RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 TSPAN10Q9H1Z9 355 aaPredicted RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 ZFP64Q9NPA5 681 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 ATXN7L1Q9ULK2 861 aaPredicted RBP4.6□□□□□ -1.67
SMN1-208ENST00000513228 KIAA1024Q9UPX6 916 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 PCDHGC4Q9Y5F7 938 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 USP3Q9Y6I4 520 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 BNIP3LO60238 219 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 CD33P20138 364 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 ATP4AP20648 1035 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 DPYDQ12882 1025 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 FZD5Q13467 585 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 MTFR1Q15390 333 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 ARTNQ5T4W7 220 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 NLRP8Q86W28 1048 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 CRISPLD1Q9H336 500 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 SEMA6BQ9H3T3 888 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 GTF3C3Q9Y5Q9 886 aa4.59□□□□□ -1.67
SMN1-208ENST00000513228 ZBTB7BO15156 539 aaPredicted RBP4.58□□□□□ -1.68
SMN1-208ENST00000513228 PSMA6P60900 246 aaKnown RBP4.58□□□□□ -1.68
SMN1-208ENST00000513228 CTBSQ01459 385 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 TBC1D8BQ0IIM8 1120 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 TEAD4Q15561 434 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 ACDQ96AP0 544 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 KLRG1Q96E93 195 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 CCDC97Q96F63 343 aaPredicted RBP4.58□□□□□ -1.68
SMN1-208ENST00000513228 CEP63Q96MT8 703 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 ZIC5Q96T25 663 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 ZDHHC3Q9NYG2 299 aa4.58□□□□□ -1.68
SMN1-208ENST00000513228 IQSEC3Q9UPP2 1182 aaPredicted RBP4.58□□□□□ -1.68
SMN1-208ENST00000513228 ATAD2Q6PL18 1390 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 NEURL1BA8MQ27 555 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L15C9J2P7 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L10C9JJH3 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L13C9JLJ4 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L12C9JPN9 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L11C9JVI0 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L21D6R901 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L18D6R9N7 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L22D6RA61 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L17D6RBQ6 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L19D6RCP7 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L20D6RJB6 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 MAPTP10636 758 aaKnown RBP4.57□□□□□ -1.68
SMN1-208ENST00000513228 USP17L24Q0WX57 530 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 CRTC2Q53ET0 693 aaPredicted RBP4.57□□□□□ -1.68
SMN1-208ENST00000513228 SH3PXD2AQ5TCZ1 1133 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 GOLGA6L1Q8N7Z2 621 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 FAM200AQ8TCP9 573 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 ZDHHC1Q8WTX9 485 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 PHACTR1Q9C0D0 580 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 ANKIB1Q9P2G1 1089 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 GGA1Q9UJY5 639 aa4.57□□□□□ -1.68
SMN1-208ENST00000513228 GDF2Q9UK05 429 aaPredicted RBP4.57□□□□□ -1.68
SMN1-208ENST00000513228 THBS1P07996 1170 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 PCBP4P57723 403 aaKnown RBP4.56□□□□□ -1.68
SMN1-208ENST00000513228 NEUROD1Q13562 356 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 FOXD4L6Q3SYB3 417 aaPredicted RBP4.56□□□□□ -1.68
SMN1-208ENST00000513228 FOXD4L3Q6VB84 417 aaPredicted RBP4.56□□□□□ -1.68
SMN1-208ENST00000513228 ANKMY2Q8IV38 441 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 SIX5Q8N196 739 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 GAS2L2Q8NHY3 880 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 EDARADDQ8WWZ3 215 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 ZMYND15Q9H091 742 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 IGFLR1Q9H665 355 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 MARK1Q9P0L2 795 aa4.56□□□□□ -1.68
SMN1-208ENST00000513228 OIP5O43482 229 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 ADH6P28332 368 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 TNP2Q05952 138 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 PTK7Q13308 1070 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 C14orf37Q86TY3 774 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 HSH2DQ96JZ2 352 aa4.55□□□□□ -1.68
SMN1-208ENST00000513228 ARID3CA6NKF2 412 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 FAM196BA6NMK8 535 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 M0R2N6 131 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 EML1O00423 815 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 ALAS2P22557 587 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 TXKP42681 527 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 EPHA4P54764 986 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 KANK4Q5T7N3 995 aaPredicted RBP4.54□□□□□ -1.68
SMN1-208ENST00000513228 ALDH16A1Q8IZ83 802 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 PNMA5Q96PV4 448 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 BRD7Q9NPI1 651 aa4.54□□□□□ -1.68
SMN1-208ENST00000513228 NOVA2Q9UNW9 492 aaKnown RBP4.54□□□□□ -1.68
SMN1-208ENST00000513228 C2CD2LO14523 706 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 FAM157BP0CG42 384 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 ARAFP10398 606 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 GRIN2CQ14957 1233 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 HIF1AQ16665 826 aa4.53□□□□□ -1.68
SMN1-208ENST00000513228 RAB44Q7Z6P3 723 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms