RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 CAMTA2O94983 1202 aa8.51□□□□□ -1.05
KDM3B-208ENST00000512928 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
KDM3B-208ENST00000512928 EIF4A1P60842 406 aaKnown RBP8.51□□□□□ -1.05
KDM3B-208ENST00000512928 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
KDM3B-208ENST00000512928 ZNF652Q9Y2D9 606 aa8.51□□□□□ -1.05
KDM3B-208ENST00000512928 NBPF26B4DH59 902 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 ST5P78524 1137 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
KDM3B-208ENST00000512928 KIF6Q6ZMV9 814 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 C2CD5Q86YS7 1000 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 BCORQ6W2J9 1755 aa8.5□□□□□ -1.05
KDM3B-208ENST00000512928 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
KDM3B-208ENST00000512928 H0YIN7 160 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 APAF1O14727 1248 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 NPM3O75607 178 aaKnown RBP8.49□□□□□ -1.05
KDM3B-208ENST00000512928 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
KDM3B-208ENST00000512928 NBPF5PQ86XG9 351 aaPredicted RBP8.49□□□□□ -1.05
KDM3B-208ENST00000512928 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
KDM3B-208ENST00000512928 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 TRIM35Q9UPQ4 493 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 NIP7Q9Y221 180 aaKnown RBP eCLIP8.49□□□□□ -1.05
KDM3B-208ENST00000512928 ARFGEF1Q9Y6D6 1849 aa8.49□□□□□ -1.05
KDM3B-208ENST00000512928 KCNA3P22001 575 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 PDE6BP35913 854 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 CCDC184Q52MB2 194 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 PRR5LQ6MZQ0 368 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
KDM3B-208ENST00000512928 SBF1O95248 1867 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 NRXN2Q9P2S2 1712 aa8.48□□□□□ -1.05
KDM3B-208ENST00000512928 ANXA1P04083 346 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 GPTP24298 496 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
KDM3B-208ENST00000512928 HLFQ16534 295 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 KRT24Q2M2I5 525 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 TTLL7Q6ZT98 887 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 BRIP1Q9BX63 1249 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 BABAM1Q9NWV8 329 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 CCDC88AQ3V6T2 1871 aa8.47□□□□□ -1.05
KDM3B-208ENST00000512928 CHL1O00533 1208 aa8.46□□□□□ -1.06
KDM3B-208ENST00000512928 PRELPP51888 382 aa8.46□□□□□ -1.06
KDM3B-208ENST00000512928 CALD1Q05682 793 aaKnown RBP8.46□□□□□ -1.06
KDM3B-208ENST00000512928 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
KDM3B-208ENST00000512928 MAP3K15Q6ZN16 1313 aa8.46□□□□□ -1.06
KDM3B-208ENST00000512928 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
KDM3B-208ENST00000512928 TIAM2Q8IVF5 1701 aa8.46□□□□□ -1.06
KDM3B-208ENST00000512928 CACNA1SQ13698 1873 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 CAPN15O75808 1086 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 RASSF7Q02833 373 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 C9orf131Q5VYM1 1079 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 CFAP44Q96MT7 982 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 RNF181Q9P0P0 153 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
KDM3B-208ENST00000512928 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 ANKRD31Q8N7Z5 1873 aa8.45□□□□□ -1.06
KDM3B-208ENST00000512928 ERVV-1B6SEH8 477 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 ELL2O00472 640 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-208ENST00000512928 C21orf2O43822 256 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 GNAI1P63096 354 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
KDM3B-208ENST00000512928 NUTM1Q86Y26 1132 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 XAGE3Q8WTP9 111 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 NYXQ9GZU5 481 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 IFT57Q9NWB7 429 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
KDM3B-208ENST00000512928 C1QBPQ07021 282 aaKnown RBP8.43□□□□□ -1.06
KDM3B-208ENST00000512928 PDIA6Q15084 440 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 ERFEQ4G0M1 354 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 FAM9BQ8IZU0 186 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 CNKSR1Q969H4 720 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 ZNF428Q96B54 188 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 MASTLQ96GX5 879 aa8.43□□□□□ -1.06
KDM3B-208ENST00000512928 TNRC6CQ9HCJ0 1690 aaKnown RBP8.43□□□□□ -1.06
KDM3B-208ENST00000512928 RGL2O15211 777 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 SRGNP10124 158 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 NPR1P16066 1061 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 STYK1Q6J9G0 422 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 PRPF40BQ6NWY9 871 aaKnown RBP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 GIGYF2Q6Y7W6 1299 aaKnown RBP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
KDM3B-208ENST00000512928 RPGRQ92834 1020 aaKnown RBP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 TSR2Q969E8 191 aaKnown RBP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 DDX21Q9NR30 783 aaKnown RBP eCLIP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 DBF4Q9UBU7 674 aaPredicted RBP8.42□□□□□ -1.06
KDM3B-208ENST00000512928 UBN2Q6ZU65 1347 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms