RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 EFHC2Q5JST6 749 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 COX20Q5RI15 118 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 CAPN12Q6ZSI9 719 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 CRIPAKQ8N1N5 446 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 ZDHHC1Q8WTX9 485 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 MYO19Q96H55 970 aa7.09□□□□□ -1.27
HTT-210ENST00000512909 GPC6Q9Y625 555 aaPredicted RBP7.09□□□□□ -1.27
HTT-210ENST00000512909 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 MPSTP25325 297 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 TXLNAP40222 546 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 SH3PXD2AQ5TCZ1 1133 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 SAP130Q9H0E3 1048 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 GPAMQ9HCL2 828 aa7.08□□□□□ -1.28
HTT-210ENST00000512909 EPB42P16452 691 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 ERCC3P19447 782 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 MSX1P28360 303 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
HTT-210ENST00000512909 AAASQ9NRG9 546 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 KLK14Q9P0G3 267 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
HTT-210ENST00000512909 CCDC180Q9P1Z9 1646 aa7.06□□□□□ -1.28
HTT-210ENST00000512909 H7C1W4 665 aa7.06□□□□□ -1.28
HTT-210ENST00000512909 F11P03951 625 aa7.06□□□□□ -1.28
HTT-210ENST00000512909 RPLP1P05386 114 aaKnown RBP7.06□□□□□ -1.28
HTT-210ENST00000512909 PIK3R5Q8WYR1 880 aa7.06□□□□□ -1.28
HTT-210ENST00000512909 DYRK1BQ9Y463 629 aa7.06□□□□□ -1.28
HTT-210ENST00000512909 ZAP70P43403 619 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 USP5P45974 858 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 EIF1AXP47813 144 aaKnown RBP7.05□□□□□ -1.28
HTT-210ENST00000512909 DNM1Q05193 864 aaKnown RBP7.05□□□□□ -1.28
HTT-210ENST00000512909 PDE3BQ13370 1112 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 FIGNL1Q6PIW4 674 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 LRRC69Q6ZNQ3 347 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
HTT-210ENST00000512909 FNDC3AQ9Y2H6 1198 aaKnown RBP7.05□□□□□ -1.28
HTT-210ENST00000512909 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 TGFBR3LH3BV60 316 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 RANGAP1P46060 587 aaPredicted RBP7.04□□□□□ -1.28
HTT-210ENST00000512909 FOXR1Q6PIV2 292 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 TREML1Q86YW5 311 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 RUBCNLQ9H714 662 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 DNMT3LQ9UJW3 386 aa7.04□□□□□ -1.28
HTT-210ENST00000512909 C11orf95C9JLR9 678 aaPredicted RBP7.03□□□□□ -1.28
HTT-210ENST00000512909 MICAL2O94851 1124 aa7.03□□□□□ -1.28
HTT-210ENST00000512909 NEFLP07196 543 aa7.03□□□□□ -1.28
HTT-210ENST00000512909 ARSDP51689 593 aa7.03□□□□□ -1.28
HTT-210ENST00000512909 C8orf34Q49A92 452 aa7.03□□□□□ -1.28
HTT-210ENST00000512909 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
HTT-210ENST00000512909 ZNF787Q6DD87 383 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 POTEAQ6S8J7 498 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 NLRP8Q86W28 1048 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 CMTR1Q8N1G2 835 aaKnown RBP7.02□□□□□ -1.29
HTT-210ENST00000512909 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 EDEM1Q92611 657 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 CITED4Q96RK1 184 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 ZIC5Q96T25 663 aa7.02□□□□□ -1.29
HTT-210ENST00000512909 NUCKS1Q9H1E3 243 aaKnown RBP7.02□□□□□ -1.29
HTT-210ENST00000512909 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 TNFRSF10BO14763 440 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
HTT-210ENST00000512909 IDH3AP50213 366 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 PTSQ03393 145 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 EHHADHQ08426 723 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 LBRQ14739 615 aaKnown RBP7.01□□□□□ -1.29
HTT-210ENST00000512909 IER5Q5VY09 327 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 TRERF1Q96PN7 1200 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
HTT-210ENST00000512909 NPR3P17342 541 aa7□□□□□ -1.29
HTT-210ENST00000512909 ITGAEP38570 1179 aa7□□□□□ -1.29
HTT-210ENST00000512909 FGD1P98174 961 aa7□□□□□ -1.29
HTT-210ENST00000512909 ATP2B2Q01814 1243 aa7□□□□□ -1.29
HTT-210ENST00000512909 ZNF326Q5BKZ1 582 aaKnown RBP7□□□□□ -1.29
HTT-210ENST00000512909 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
HTT-210ENST00000512909 RGL4Q8IZJ4 473 aa7□□□□□ -1.29
HTT-210ENST00000512909 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
HTT-210ENST00000512909 TRIM47Q96LD4 638 aa7□□□□□ -1.29
HTT-210ENST00000512909 DMRTB1Q96MA1 342 aa7□□□□□ -1.29
HTT-210ENST00000512909 GMPR2Q9P2T1 348 aaKnown RBP7□□□□□ -1.29
HTT-210ENST00000512909 POLIQ9UNA4 740 aa7□□□□□ -1.29
HTT-210ENST00000512909 CDC14CA4D256 554 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 ANKRD33BA6NCL7 494 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 KHNYNO15037 678 aaKnown RBP6.99□□□□□ -1.29
HTT-210ENST00000512909 ATXN7O15265 892 aaPredicted RBP6.99□□□□□ -1.29
HTT-210ENST00000512909 ATP4AP20648 1035 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 NEUROD1Q13562 356 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 ETFBKMTQ8IXQ9 262 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 GMCL1Q96IK5 515 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 PNMA5Q96PV4 448 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
HTT-210ENST00000512909 ARHGAP4P98171 946 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
HTT-210ENST00000512909 CCDC155Q8N6L0 562 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 ZNF280CQ8ND82 737 aa6.98□□□□□ -1.29
HTT-210ENST00000512909 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms