RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 PPLO60437 1756 aa10.04□□□□□ -0.8
RFC1-215ENST00000512881 XPCQ01831 940 aaPredicted RBP10.04□□□□□ -0.8
RFC1-215ENST00000512881 SETD1AO15047 1707 aaKnown RBP10.04□□□□□ -0.8
RFC1-215ENST00000512881 NALCNQ8IZF0 1738 aa10.04□□□□□ -0.8
RFC1-215ENST00000512881 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
RFC1-215ENST00000512881 NNTQ13423 1086 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
RFC1-215ENST00000512881 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 BPHLQ86WA6 291 aaPredicted RBP10.03□□□□□ -0.8
RFC1-215ENST00000512881 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 LRRN4Q8WUT4 740 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 CDK15Q96Q40 435 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 PRAM1Q96QH2 718 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 POGKQ9P215 609 aa10.03□□□□□ -0.8
RFC1-215ENST00000512881 SHPRHQ149N8 1683 aa10.02□□□□□ -0.8
RFC1-215ENST00000512881 ADH1CP00326 375 aa10.02□□□□□ -0.81
RFC1-215ENST00000512881 BMP1P13497 986 aa10.02□□□□□ -0.81
RFC1-215ENST00000512881 RBM6P78332 1123 aaKnown RBP10.02□□□□□ -0.81
RFC1-215ENST00000512881 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
RFC1-215ENST00000512881 NRXN1Q9ULB1 1477 aa10.02□□□□□ -0.81
RFC1-215ENST00000512881 NHSL1Q5SYE7 1610 aa10.01□□□□□ -0.81
RFC1-215ENST00000512881 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
RFC1-215ENST00000512881 TRIM46Q7Z4K8 759 aa10.01□□□□□ -0.81
RFC1-215ENST00000512881 FNBP4Q8N3X1 1017 aaPredicted RBP10.01□□□□□ -0.81
RFC1-215ENST00000512881 USP21Q9UK80 565 aa10.01□□□□□ -0.81
RFC1-215ENST00000512881 TRAK1Q9UPV9 953 aa10.01□□□□□ -0.81
RFC1-215ENST00000512881 MYOM2P54296 1465 aa10□□□□□ -0.81
RFC1-215ENST00000512881 CAPN5O15484 640 aaPredicted RBP10□□□□□ -0.81
RFC1-215ENST00000512881 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
RFC1-215ENST00000512881 AGERQ15109 404 aa10□□□□□ -0.81
RFC1-215ENST00000512881 NEUROD2Q15784 382 aa10□□□□□ -0.81
RFC1-215ENST00000512881 CDC42BPGQ6DT37 1551 aa10□□□□□ -0.81
RFC1-215ENST00000512881 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
RFC1-215ENST00000512881 PSME1Q06323 249 aa9.99□□□□□ -0.81
RFC1-215ENST00000512881 GPKOWQ92917 476 aaPredicted RBP eCLIP9.99□□□□□ -0.81
RFC1-215ENST00000512881 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
RFC1-215ENST00000512881 SENP2Q9HC62 589 aa9.99□□□□□ -0.81
RFC1-215ENST00000512881 SPATA31A3Q5VYP0 1347 aa9.99□□□□□ -0.81
RFC1-215ENST00000512881 PXDNQ92626 1479 aa9.98□□□□□ -0.81
RFC1-215ENST00000512881 NR3C2P08235 984 aa9.98□□□□□ -0.81
RFC1-215ENST00000512881 TIMP2P16035 220 aa9.98□□□□□ -0.81
RFC1-215ENST00000512881 HIRIP3Q9BW71 556 aaPredicted RBP9.98□□□□□ -0.81
RFC1-215ENST00000512881 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
RFC1-215ENST00000512881 TRPC5Q9UL62 973 aaPredicted RBP9.98□□□□□ -0.81
RFC1-215ENST00000512881 LAMC1P11047 1609 aa9.97□□□□□ -0.81
RFC1-215ENST00000512881 AP1G2O75843 785 aa9.97□□□□□ -0.81
RFC1-215ENST00000512881 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
RFC1-215ENST00000512881 NR6A1Q15406 480 aa9.97□□□□□ -0.81
RFC1-215ENST00000512881 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
RFC1-215ENST00000512881 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
RFC1-215ENST00000512881 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
RFC1-215ENST00000512881 CDK12Q9NYV4 1490 aaPredicted RBP9.97□□□□□ -0.81
RFC1-215ENST00000512881 IFT172Q9UG01 1749 aa9.96□□□□□ -0.81
RFC1-215ENST00000512881 MAGEB6P1A0A0J9YX57 407 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 RFC5P40937 340 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 GRM5P41594 1212 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
RFC1-215ENST00000512881 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 MAP4K5Q9Y4K4 846 aa9.96□□□□□ -0.82
RFC1-215ENST00000512881 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
RFC1-215ENST00000512881 WDR4P57081 412 aaKnown RBP9.95□□□□□ -0.82
RFC1-215ENST00000512881 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 DLC1Q96QB1 1528 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 RGS12O14924 1447 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 FSHRP23945 695 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 NR5A1Q13285 461 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 ERFEQ4G0M1 354 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 EPS8L1Q8TE68 723 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
RFC1-215ENST00000512881 BCL9LQ86UU0 1499 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 ATRNO75882 1429 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 SBNO1A3KN83 1393 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 ZC3H4Q9UPT8 1303 aaKnown RBP9.93□□□□□ -0.82
RFC1-215ENST00000512881 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 PDXDC2PQ6P474 469 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 UNC5CLQ8IV45 518 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
RFC1-215ENST00000512881 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
RFC1-215ENST00000512881 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 ITPKCQ96DU7 683 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 PCMTD1Q96MG8 357 aaPredicted RBP9.92□□□□□ -0.82
RFC1-215ENST00000512881 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
RFC1-215ENST00000512881 TNS3Q68CZ2 1445 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 ARHGEF10O15013 1369 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
RFC1-215ENST00000512881 FAM83GA6ND36 823 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 ZIC2O95409 532 aaPredicted RBP9.91□□□□□ -0.82
RFC1-215ENST00000512881 NFX1Q12986 1120 aaKnown RBP9.91□□□□□ -0.82
RFC1-215ENST00000512881 NBPF1Q3BBV0 1214 aa9.91□□□□□ -0.82
RFC1-215ENST00000512881 NGDNQ8NEJ9 315 aaKnown RBP9.91□□□□□ -0.82
RFC1-215ENST00000512881 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms