RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CRTC2Q53ET0 693 aaPredicted RBP5.16□□□□□ -1.58
PDGFC-208ENST00000512711 FIGNL1Q6PIW4 674 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 LINC00114Q6XXX2 140 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 PODNQ7Z5L7 613 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 SIX5Q8N196 739 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 BTBD6Q96KE9 485 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 LRRC4BQ9NT99 713 aa5.16□□□□□ -1.58
PDGFC-208ENST00000512711 SERTM1A2A2V5 107 aa5.15□□□□□ -1.59
PDGFC-208ENST00000512711 LMOD1P29536 600 aaPredicted RBP5.15□□□□□ -1.59
PDGFC-208ENST00000512711 SFSWAPQ12872 951 aaKnown RBP5.15□□□□□ -1.59
PDGFC-208ENST00000512711 ZNF280CQ8ND82 737 aa5.15□□□□□ -1.59
PDGFC-208ENST00000512711 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
PDGFC-208ENST00000512711 ATAD2Q6PL18 1390 aa5.15□□□□□ -1.59
PDGFC-208ENST00000512711 KRBA1A5PL33 1030 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 K7ELQ4 463 aaPredicted RBP5.14□□□□□ -1.59
PDGFC-208ENST00000512711 EFSO43281 561 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 EPXP11678 715 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 COL8A1P27658 744 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 PTK7Q13308 1070 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 CDCA8Q53HL2 280 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 FCHSD1Q86WN1 690 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 GOLGA6L1Q8N7Z2 621 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 HSH2DQ96JZ2 352 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 SUV39H2Q9H5I1 410 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 RRAGCQ9HB90 399 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 GDF2Q9UK05 429 aaPredicted RBP5.14□□□□□ -1.59
PDGFC-208ENST00000512711 GJA3Q9Y6H8 435 aa5.14□□□□□ -1.59
PDGFC-208ENST00000512711 ARAFP10398 606 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 BAG6P46379 1132 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 DPYDQ12882 1025 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 POTEAQ6S8J7 498 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 CHMP7Q8WUX9 453 aaPredicted RBP5.13□□□□□ -1.59
PDGFC-208ENST00000512711 SCG3Q8WXD2 468 aaKnown RBP5.13□□□□□ -1.59
PDGFC-208ENST00000512711 SLC30A3Q99726 388 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 PHACTR1Q9C0D0 580 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 MARK1Q9P0L2 795 aa5.13□□□□□ -1.59
PDGFC-208ENST00000512711 M0R2N6 131 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 PPP1R12BO60237 982 aaPredicted RBP5.12□□□□□ -1.59
PDGFC-208ENST00000512711 FURINP09958 794 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 FAM157BP0CG42 384 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 SEC13P55735 322 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 PSMA6P60900 246 aaKnown RBP5.12□□□□□ -1.59
PDGFC-208ENST00000512711 CFAP70Q5T0N1 1121 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 FAM182BQ5T319 152 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 SAMD5Q5TGI4 173 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 SLCO4C1Q6ZQN7 724 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 Q8N3U1 123 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 ARXQ96QS3 562 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 HINFPQ9BQA5 517 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 C2orf49Q9BVC5 232 aaPredicted RBP5.12□□□□□ -1.59
PDGFC-208ENST00000512711 VRTNQ9H8Y1 702 aa5.12□□□□□ -1.59
PDGFC-208ENST00000512711 AMPD1P23109 780 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 C1orf53Q5VUE5 145 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 LARP1Q6PKG0 1096 aaKnown RBP5.11□□□□□ -1.59
PDGFC-208ENST00000512711 RAB44Q7Z6P3 723 aaPredicted RBP5.11□□□□□ -1.59
PDGFC-208ENST00000512711 ALDH16A1Q8IZ83 802 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 RHPN1Q8TCX5 695 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 NGLY1Q96IV0 654 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 SUSD3Q96L08 255 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 NEUROD4Q9HD90 331 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 PRR12Q9ULL5 1215 aa5.11□□□□□ -1.59
PDGFC-208ENST00000512711 RFX1P22670 979 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 ADH6P28332 368 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 HIRAP54198 1017 aaPredicted RBP5.1□□□□□ -1.59
PDGFC-208ENST00000512711 ZNF468Q5VIY5 522 aaPredicted RBP5.1□□□□□ -1.59
PDGFC-208ENST00000512711 CHSY3Q70JA7 882 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 SYT9Q86SS6 491 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 ANKMY2Q8IV38 441 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 CEP63Q96MT8 703 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 BCS1LQ9Y276 419 aa5.1□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L15C9J2P7 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L10C9JJH3 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L13C9JLJ4 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L12C9JPN9 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L11C9JVI0 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L21D6R901 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L18D6R9N7 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L22D6RA61 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L17D6RBQ6 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L19D6RCP7 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L20D6RJB6 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 DGKGP49619 791 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 USP17L24Q0WX57 530 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 PSMG3-AS1Q96PY0 264 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 MDFIQ99750 246 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 MKL2Q9ULH7 1088 aa5.09□□□□□ -1.59
PDGFC-208ENST00000512711 RBM19Q9Y4C8 960 aaKnown RBP5.09□□□□□ -1.59
PDGFC-208ENST00000512711 FAM196BA6NMK8 535 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
PDGFC-208ENST00000512711 LAMC2Q13753 1193 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 C8orf86Q6ZUL3 223 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 STAG2Q8N3U4 1231 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 BRD7Q9NPI1 651 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 STARD13Q9Y3M8 1113 aa5.08□□□□□ -1.6
PDGFC-208ENST00000512711 SRPK2P78362 688 aaKnown RBP5.07□□□□□ -1.6
PDGFC-208ENST00000512711 TYRO3Q06418 890 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 SPEM2Q0P670 501 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 BTLAQ7Z6A9 289 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 TRIM11Q96F44 468 aa5.07□□□□□ -1.6
PDGFC-208ENST00000512711 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms