RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ACSBG1Q96GR2 724 aa10.02□□□□□ -0.81
USP46-208ENST00000512656 ANKRD36BQ8N2N9 1353 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 GNPATO15228 680 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
USP46-208ENST00000512656 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 LTN1O94822 1766 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 USP47Q96K76 1375 aa10.01□□□□□ -0.81
USP46-208ENST00000512656 ZBTB7AO95365 584 aa10□□□□□ -0.81
USP46-208ENST00000512656 HOXC9P31274 260 aa10□□□□□ -0.81
USP46-208ENST00000512656 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
USP46-208ENST00000512656 DDX54Q8TDD1 881 aaKnown RBP10□□□□□ -0.81
USP46-208ENST00000512656 ZNF516Q92618 1163 aa10□□□□□ -0.81
USP46-208ENST00000512656 PCDHB3Q9Y5E6 796 aa10□□□□□ -0.81
USP46-208ENST00000512656 RTL1A6NKG5 1358 aa10□□□□□ -0.81
USP46-208ENST00000512656 NHSQ6T4R5 1651 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 GGCXP38435 758 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
USP46-208ENST00000512656 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 MTFR1LQ9H019 292 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
USP46-208ENST00000512656 FYB1O15117 783 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 GPR37O15354 613 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 ZPR1O75312 459 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 YY1P25490 414 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 FAM161AQ3B820 660 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 PDGFDQ9GZP0 370 aaPredicted RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 FAM208AQ9UK61 1670 aaKnown RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
USP46-208ENST00000512656 SMG6Q86US8 1419 aaKnown RBP9.98□□□□□ -0.81
USP46-208ENST00000512656 KAT6BQ8WYB5 2073 aa9.97□□□□□ -0.81
USP46-208ENST00000512656 CASZ1Q86V15 1759 aa9.97□□□□□ -0.81
USP46-208ENST00000512656 HMGB2P26583 209 aaKnown RBP9.97□□□□□ -0.81
USP46-208ENST00000512656 COPS2P61201 443 aa9.97□□□□□ -0.81
USP46-208ENST00000512656 LAPTM4AQ15012 233 aa9.97□□□□□ -0.81
USP46-208ENST00000512656 RAPGEF4Q8WZA2 1011 aa9.97□□□□□ -0.81
USP46-208ENST00000512656 SYTL4Q96C24 671 aaPredicted RBP9.97□□□□□ -0.81
USP46-208ENST00000512656 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
USP46-208ENST00000512656 FBLN1P23142 703 aa9.96□□□□□ -0.82
USP46-208ENST00000512656 RRS1Q15050 365 aaKnown RBP9.96□□□□□ -0.82
USP46-208ENST00000512656 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
USP46-208ENST00000512656 GGNBP2Q9H3C7 697 aa9.96□□□□□ -0.82
USP46-208ENST00000512656 KIF24Q5T7B8 1368 aa9.96□□□□□ -0.82
USP46-208ENST00000512656 TATP17735 454 aaPredicted RBP9.95□□□□□ -0.82
USP46-208ENST00000512656 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
USP46-208ENST00000512656 BTAF1O14981 1849 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 INSRP06213 1382 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 FLT4P35916 1363 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 CFHP08603 1231 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 ZNF827Q17R98 1081 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 NBPF6Q5VWK0 638 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 NBPF4Q96M43 638 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 ARXQ96QS3 562 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 SYT17Q9BSW7 474 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 FHDC1Q9C0D6 1143 aaPredicted RBP9.94□□□□□ -0.82
USP46-208ENST00000512656 LRRC4BQ9NT99 713 aa9.94□□□□□ -0.82
USP46-208ENST00000512656 SLC10A3P09131 477 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 POLD1P28340 1107 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 NKX2-3Q8TAU0 364 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 TFCP2L1Q9NZI6 479 aa9.93□□□□□ -0.82
USP46-208ENST00000512656 MEGF6O75095 1541 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 PCDH11XQ9BZA7 1347 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 PCDH11YQ9BZA8 1340 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
USP46-208ENST00000512656 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
USP46-208ENST00000512656 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
USP46-208ENST00000512656 MAP3K5Q99683 1374 aa9.91□□□□□ -0.82
USP46-208ENST00000512656 MYOM1P52179 1685 aa9.91□□□□□ -0.82
USP46-208ENST00000512656 FECHP22830 423 aa9.91□□□□□ -0.82
USP46-208ENST00000512656 CCNL1Q9UK58 526 aaPredicted RBP9.91□□□□□ -0.82
USP46-208ENST00000512656 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.82
USP46-208ENST00000512656 PPM1GO15355 546 aaPredicted RBP9.9□□□□□ -0.82
USP46-208ENST00000512656 NR1I2O75469 434 aa9.9□□□□□ -0.82
USP46-208ENST00000512656 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
USP46-208ENST00000512656 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
USP46-208ENST00000512656 NSD2O96028 1365 aa9.89□□□□□ -0.83
USP46-208ENST00000512656 PNPLA7Q6ZV29 1317 aa9.89□□□□□ -0.83
USP46-208ENST00000512656 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
USP46-208ENST00000512656 SMARCC1Q92922 1105 aaPredicted RBP9.89□□□□□ -0.83
USP46-208ENST00000512656 SPG7Q9UQ90 795 aa9.89□□□□□ -0.83
USP46-208ENST00000512656 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
USP46-208ENST00000512656 WASHC2AQ641Q2 1341 aa9.88□□□□□ -0.83
USP46-208ENST00000512656 DOT1LQ8TEK3 1739 aa9.88□□□□□ -0.83
USP46-208ENST00000512656 KCNQ4P56696 695 aa9.88□□□□□ -0.83
USP46-208ENST00000512656 KIF20BQ96Q89 1820 aa9.88□□□□□ -0.83
USP46-208ENST00000512656 CYP27B1O15528 508 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP46-208ENST00000512656 GPR162Q16538 588 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 MPRIPQ6WCQ1 1025 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms