RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 UBXN4Q92575 508 aa6.92□□□□□ -1.3
PDS5A-209ENST00000512643 IFT43Q96FT9 208 aa6.92□□□□□ -1.3
PDS5A-209ENST00000512643 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
PDS5A-209ENST00000512643 FHDC1Q9C0D6 1143 aaPredicted RBP6.92□□□□□ -1.3
PDS5A-209ENST00000512643 PCSK2P16519 638 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 CENPCQ03188 943 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 METTL16Q86W50 562 aaKnown RBP6.91□□□□□ -1.3
PDS5A-209ENST00000512643 ZNF295-AS1Q8N0V1 137 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 KDF1Q8NAX2 398 aaPredicted RBP6.91□□□□□ -1.3
PDS5A-209ENST00000512643 NLRP3Q96P20 1036 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 METTL5Q9NRN9 209 aaKnown RBP6.91□□□□□ -1.3
PDS5A-209ENST00000512643 HCSTQ9UBK5 93 aa6.91□□□□□ -1.3
PDS5A-209ENST00000512643 ALDH1A1P00352 501 aa6.9□□□□□ -1.3
PDS5A-209ENST00000512643 GNA15P30679 374 aa6.9□□□□□ -1.3
PDS5A-209ENST00000512643 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
PDS5A-209ENST00000512643 RNF34Q969K3 372 aa6.9□□□□□ -1.3
PDS5A-209ENST00000512643 EMID1Q96A84 441 aaPredicted RBP6.9□□□□□ -1.3
PDS5A-209ENST00000512643 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
PDS5A-209ENST00000512643 ZNF76P36508 570 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 ORC1Q13415 861 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 PPARGC1BQ86YN6 1023 aaKnown RBP6.89□□□□□ -1.31
PDS5A-209ENST00000512643 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
PDS5A-209ENST00000512643 FBF1Q8TES7 1133 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 NUDT16Q96DE0 195 aaKnown RBP6.89□□□□□ -1.31
PDS5A-209ENST00000512643 AGBL1Q96MI9 1066 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 ZSCAN10Q96SZ4 725 aaPredicted RBP6.89□□□□□ -1.31
PDS5A-209ENST00000512643 NIFKQ9BYG3 293 aaKnown RBP6.89□□□□□ -1.31
PDS5A-209ENST00000512643 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
PDS5A-209ENST00000512643 GTF2E1P29083 439 aaPredicted RBP6.88□□□□□ -1.31
PDS5A-209ENST00000512643 PTGIRP43119 386 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 RELBQ01201 579 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
PDS5A-209ENST00000512643 Q6ZVU0 165 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 CDAN1Q8IWY9 1227 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 TTC16Q8NEE8 873 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 ITPKCQ96DU7 683 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 CRELD1Q96HD1 420 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 TINF2Q9BSI4 451 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 TGIF2Q9GZN2 237 aa6.88□□□□□ -1.31
PDS5A-209ENST00000512643 EIF1AYO14602 144 aaKnown RBP6.87□□□□□ -1.31
PDS5A-209ENST00000512643 ZIC2O95409 532 aaPredicted RBP6.87□□□□□ -1.31
PDS5A-209ENST00000512643 TXLNAP40222 546 aa6.87□□□□□ -1.31
PDS5A-209ENST00000512643 SLC19A1P41440 591 aa6.87□□□□□ -1.31
PDS5A-209ENST00000512643 PLA2G4AP47712 749 aa6.87□□□□□ -1.31
PDS5A-209ENST00000512643 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
PDS5A-209ENST00000512643 CDK11AQ9UQ88 783 aaPredicted RBP6.87□□□□□ -1.31
PDS5A-209ENST00000512643 A6NHS1 94 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 GNASQ5JWF2 1037 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 RHPN1Q8TCX5 695 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 TANGO6Q9C0B7 1094 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 ZNF395Q9H8N7 513 aaPredicted RBP6.86□□□□□ -1.31
PDS5A-209ENST00000512643 FAM13BQ9NYF5 915 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 BCS1LQ9Y276 419 aa6.86□□□□□ -1.31
PDS5A-209ENST00000512643 HMGB1P09429 215 aaKnown RBP6.85□□□□□ -1.31
PDS5A-209ENST00000512643 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
PDS5A-209ENST00000512643 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
PDS5A-209ENST00000512643 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
PDS5A-209ENST00000512643 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
PDS5A-209ENST00000512643 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
PDS5A-209ENST00000512643 CAPN10Q9HC96 672 aa6.85□□□□□ -1.31
PDS5A-209ENST00000512643 OPLAHO14841 1288 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 MICAL2O94851 1124 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
PDS5A-209ENST00000512643 EIF4BP23588 611 aaKnown RBP6.84□□□□□ -1.31
PDS5A-209ENST00000512643 HIF1AQ16665 826 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 NBPF1Q3BBV0 1214 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 SLC27A3Q5K4L6 730 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 RNF166Q96A37 237 aaPredicted RBP6.84□□□□□ -1.31
PDS5A-209ENST00000512643 FRMD6Q96NE9 622 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 KLF16Q9BXK1 252 aaPredicted RBP6.84□□□□□ -1.31
PDS5A-209ENST00000512643 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 ACBD3Q9H3P7 528 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
PDS5A-209ENST00000512643 TGFBR3LH3BV60 316 aa6.83□□□□□ -1.32
PDS5A-209ENST00000512643 SMARCA5O60264 1052 aaPredicted RBP6.83□□□□□ -1.32
PDS5A-209ENST00000512643 CPNE3O75131 537 aaKnown RBP6.83□□□□□ -1.32
PDS5A-209ENST00000512643 CTSHP09668 335 aa6.83□□□□□ -1.32
PDS5A-209ENST00000512643 FOXC1Q12948 553 aa6.83□□□□□ -1.32
PDS5A-209ENST00000512643 ZNF697Q5TEC3 545 aa6.83□□□□□ -1.32
PDS5A-209ENST00000512643 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.83□□□□□ -1.32
PDS5A-209ENST00000512643 TIMP2P16035 220 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 TNNI2P48788 182 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 GNL2Q13823 731 aaKnown RBP6.82□□□□□ -1.32
PDS5A-209ENST00000512643 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDS5A-209ENST00000512643 C4orf17Q53FE4 359 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 SPRYD7Q5W111 196 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 SNIP1Q8TAD8 396 aaKnown RBP6.82□□□□□ -1.32
PDS5A-209ENST00000512643 PRKAG2Q9UGJ0 569 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 PCDHGB7Q9Y5F8 929 aa6.82□□□□□ -1.32
PDS5A-209ENST00000512643 GPC1P35052 558 aa6.81□□□□□ -1.32
PDS5A-209ENST00000512643 ZNF394Q53GI3 561 aa6.81□□□□□ -1.32
PDS5A-209ENST00000512643 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
PDS5A-209ENST00000512643 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms