RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
LINC01258-201ENST00000512517 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
LINC01258-201ENST00000512517 CWC15Q9P013 229 aaKnown RBP10.63□□□□□ -0.71
LINC01258-201ENST00000512517 NHSL1Q5SYE7 1610 aa10.63□□□□□ -0.71
LINC01258-201ENST00000512517 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
LINC01258-201ENST00000512517 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
LINC01258-201ENST00000512517 TTC36A6NLP5 189 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 TDO2P48775 406 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 UVSSAQ2YD98 709 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
LINC01258-201ENST00000512517 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 THUMPD2Q9BTF0 503 aaKnown RBP10.62□□□□□ -0.71
LINC01258-201ENST00000512517 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 SSR1P43307 286 aaKnown RBP10.62□□□□□ -0.71
LINC01258-201ENST00000512517 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
LINC01258-201ENST00000512517 TSR2Q969E8 191 aaKnown RBP10.62□□□□□ -0.71
LINC01258-201ENST00000512517 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
LINC01258-201ENST00000512517 A0A1B0GUL7 405 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NOM1Q5C9Z4 860 aaKnown RBP10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NBPF10Q6P3W6 841 aaKnown RBP10.61□□□□□ -0.71
LINC01258-201ENST00000512517 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 ANKRD24Q8TF21 1146 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
LINC01258-201ENST00000512517 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 SH3BP1Q9Y3L3 701 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 FAM83GA6ND36 823 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 SMTNL1A8MU46 457 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NUCB2P80303 420 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NBPF6Q5VWK0 638 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
LINC01258-201ENST00000512517 NBPF4Q96M43 638 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 JRKLQ9Y4A0 524 aa10.61□□□□□ -0.71
LINC01258-201ENST00000512517 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 KIF3CO14782 793 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 SSFA2P28290 1259 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 TRDNQ13061 729 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 RPAINQ86UA6 219 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 TRERF1Q96PN7 1200 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 CXorf56Q9H5V9 222 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 LMBRD1Q9NUN5 540 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
LINC01258-201ENST00000512517 KDRP35968 1356 aa10.6□□□□□ -0.71
LINC01258-201ENST00000512517 IRF6O14896 467 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 ATP2B1P20020 1258 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 TEX35Q5T0J7 233 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 GPATCH11Q8N954 259 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 KIF1BPQ96EK5 621 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 MYO1CO00159 1063 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 MBD3O95983 291 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 GSCP56915 257 aaPredicted RBP10.59□□□□□ -0.71
LINC01258-201ENST00000512517 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
LINC01258-201ENST00000512517 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
LINC01258-201ENST00000512517 ZNF592Q92610 1267 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 NLRP2Q9NX02 1062 aa10.59□□□□□ -0.71
LINC01258-201ENST00000512517 SEMA3FQ13275 785 aa10.58□□□□□ -0.72
LINC01258-201ENST00000512517 MCM10Q7L590 875 aa10.58□□□□□ -0.72
LINC01258-201ENST00000512517 TSPY26PQ9H489 355 aa10.58□□□□□ -0.72
LINC01258-201ENST00000512517 ABCA3Q99758 1704 aa10.58□□□□□ -0.72
LINC01258-201ENST00000512517 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
LINC01258-201ENST00000512517 PPP1R12AO14974 1030 aaPredicted RBP10.57□□□□□ -0.72
LINC01258-201ENST00000512517 ZKSCAN8Q15776 578 aaPredicted RBP10.57□□□□□ -0.72
LINC01258-201ENST00000512517 RNF217Q8TC41 542 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
LINC01258-201ENST00000512517 SUFUQ9UMX1 484 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 ERBB3P21860 1342 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 COL18A1P39060 1754 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 TOM1O60784 492 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 RABEP1Q15276 862 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 KIAA1524Q8TCG1 905 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 IL16Q14005 1332 aa10.57□□□□□ -0.72
LINC01258-201ENST00000512517 UBAP1LF5GYI3 381 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
LINC01258-201ENST00000512517 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
LINC01258-201ENST00000512517 RNF20Q5VTR2 975 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
LINC01258-201ENST00000512517 SUGP1Q8IWZ8 645 aaKnown RBP10.56□□□□□ -0.72
LINC01258-201ENST00000512517 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
LINC01258-201ENST00000512517 PAXBP1Q9Y5B6 917 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 BCAR3O75815 825 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 LRCH2Q5VUJ6 765 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 BCL2L13Q9BXK5 485 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 TMX1Q9H3N1 280 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
LINC01258-201ENST00000512517 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
LINC01258-201ENST00000512517 GNAI1P63096 354 aa10.55□□□□□ -0.72
LINC01258-201ENST00000512517 GPS2Q13227 327 aa10.55□□□□□ -0.72
LINC01258-201ENST00000512517 BMS1Q14692 1282 aaKnown RBP10.55□□□□□ -0.72
LINC01258-201ENST00000512517 SYT10Q6XYQ8 523 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms