RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NBPF26B4DH59 902 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 PRELPP51888 382 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 NBPF10Q6P3W6 841 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 NBPF15Q8N660 670 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
CCHCR1-229ENST00000512418 C21orf2O43822 256 aa19.46■□□□□ 0.71
CCHCR1-229ENST00000512418 STYK1Q6J9G0 422 aa19.46■□□□□ 0.71
CCHCR1-229ENST00000512418 CNKSR1Q969H4 720 aa19.46■□□□□ 0.71
CCHCR1-229ENST00000512418 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
CCHCR1-229ENST00000512418 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 ARFGEF2Q9Y6D5 1785 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 GLTPD2A6NH11 291 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 SRGNP10124 158 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 FSTL1Q12841 308 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 MASTLQ96GX5 879 aa19.45■□□□□ 0.7
CCHCR1-229ENST00000512418 ZNF219Q9P2Y4 722 aaPredicted RBP19.44■□□□□ 0.7
CCHCR1-229ENST00000512418 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCHCR1-229ENST00000512418 RALBP1Q15311 655 aa19.43■□□□□ 0.7
CCHCR1-229ENST00000512418 PRPF40BQ6NWY9 871 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-229ENST00000512418 SLX4Q8IY92 1834 aa19.43■□□□□ 0.7
CCHCR1-229ENST00000512418 LTBP3Q9NS15 1303 aa19.43■□□□□ 0.7
CCHCR1-229ENST00000512418 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
CCHCR1-229ENST00000512418 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 EIF4A1P60842 406 aaKnown RBP19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 SOGA3Q5TF21 947 aa19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
CCHCR1-229ENST00000512418 DICER1Q9UPY3 1922 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-229ENST00000512418 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-229ENST00000512418 KLRG2A4D1S0 409 aaPredicted RBP19.4■□□□□ 0.7
CCHCR1-229ENST00000512418 HLFQ16534 295 aa19.4■□□□□ 0.7
CCHCR1-229ENST00000512418 ERFEQ4G0M1 354 aa19.4■□□□□ 0.7
CCHCR1-229ENST00000512418 SMC1BQ8NDV3 1235 aa19.4■□□□□ 0.7
CCHCR1-229ENST00000512418 NPR1P16066 1061 aa19.39■□□□□ 0.69
CCHCR1-229ENST00000512418 DPY19L2Q6NUT2 758 aa19.39■□□□□ 0.69
CCHCR1-229ENST00000512418 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
CCHCR1-229ENST00000512418 MAP3K15Q6ZN16 1313 aa19.38■□□□□ 0.69
CCHCR1-229ENST00000512418 NGEFQ8N5V2 710 aa19.38■□□□□ 0.69
CCHCR1-229ENST00000512418 DNAJC5GQ8N7S2 189 aa19.38■□□□□ 0.69
CCHCR1-229ENST00000512418 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 FAM177BA6PVY3 158 aa19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 GTF2E1P29083 439 aaPredicted RBP19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 KIF6Q6ZMV9 814 aa19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-229ENST00000512418 RIPK4P57078 832 aa19.36■□□□□ 0.69
CCHCR1-229ENST00000512418 CCDC93Q567U6 631 aa19.36■□□□□ 0.69
CCHCR1-229ENST00000512418 C7orf43Q8WVR3 580 aa19.36■□□□□ 0.69
CCHCR1-229ENST00000512418 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
CCHCR1-229ENST00000512418 NUP98P52948 1817 aa19.36■□□□□ 0.69
CCHCR1-229ENST00000512418 MYL6BP14649 208 aa19.35■□□□□ 0.69
CCHCR1-229ENST00000512418 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
CCHCR1-229ENST00000512418 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-229ENST00000512418 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
CCHCR1-229ENST00000512418 DDX10Q13206 875 aaKnown RBP19.34■□□□□ 0.69
CCHCR1-229ENST00000512418 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
CCHCR1-229ENST00000512418 BABAM1Q9NWV8 329 aa19.34■□□□□ 0.69
CCHCR1-229ENST00000512418 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
CCHCR1-229ENST00000512418 POTECB2RU33 542 aa19.33■□□□□ 0.68
CCHCR1-229ENST00000512418 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
CCHCR1-229ENST00000512418 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
CCHCR1-229ENST00000512418 ZBTB3Q9H5J0 574 aa19.33■□□□□ 0.68
CCHCR1-229ENST00000512418 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
CCHCR1-229ENST00000512418 HTRA3P83110 453 aa19.32■□□□□ 0.68
CCHCR1-229ENST00000512418 CRY2Q49AN0 593 aa19.32■□□□□ 0.68
CCHCR1-229ENST00000512418 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
CCHCR1-229ENST00000512418 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCHCR1-229ENST00000512418 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
CCHCR1-229ENST00000512418 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
CCHCR1-229ENST00000512418 KLRG1Q96E93 195 aa19.31■□□□□ 0.68
CCHCR1-229ENST00000512418 GPTP24298 496 aa19.3■□□□□ 0.68
CCHCR1-229ENST00000512418 GIGYF2Q6Y7W6 1299 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-229ENST00000512418 DDNO94850 711 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-229ENST00000512418 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
CCHCR1-229ENST00000512418 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
CCHCR1-229ENST00000512418 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
CCHCR1-229ENST00000512418 EIF2S2P20042 333 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-229ENST00000512418 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
CCHCR1-229ENST00000512418 OLFM4Q6UX06 510 aa19.28■□□□□ 0.68
CCHCR1-229ENST00000512418 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
CCHCR1-229ENST00000512418 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCHCR1-229ENST00000512418 PDIA6Q15084 440 aa19.27■□□□□ 0.68
CCHCR1-229ENST00000512418 CCDC146Q8IYE0 955 aa19.27■□□□□ 0.68
CCHCR1-229ENST00000512418 JMYQ8N9B5 988 aa19.27■□□□□ 0.68
CCHCR1-229ENST00000512418 RPGRQ92834 1020 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-229ENST00000512418 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 IQCA1LA6NCM1 817 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 NTSR2O95665 410 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 HOXA10P31260 410 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 PARP10Q53GL7 1025 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 L3MBTL3Q96JM7 780 aaPredicted RBP19.26■□□□□ 0.67
CCHCR1-229ENST00000512418 SCN4AP35499 1836 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms