RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
PROM1-213ENST00000512304 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
PROM1-213ENST00000512304 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
PROM1-213ENST00000512304 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 TRAF5O00463 557 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 EPHX2P34913 555 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 MCOLN1Q9GZU1 580 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
PROM1-213ENST00000512304 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
PROM1-213ENST00000512304 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
PROM1-213ENST00000512304 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
PROM1-213ENST00000512304 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
PROM1-213ENST00000512304 CAPNS2Q96L46 248 aa12.61□□□□□ -0.39
PROM1-213ENST00000512304 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
PROM1-213ENST00000512304 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
PROM1-213ENST00000512304 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
PROM1-213ENST00000512304 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
PROM1-213ENST00000512304 SRGNP10124 158 aa12.6□□□□□ -0.39
PROM1-213ENST00000512304 MAP2K1Q02750 393 aaPredicted RBP12.6□□□□□ -0.39
PROM1-213ENST00000512304 CST9Q5W186 159 aa12.6□□□□□ -0.39
PROM1-213ENST00000512304 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
PROM1-213ENST00000512304 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
PROM1-213ENST00000512304 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
PROM1-213ENST00000512304 PDE6BP35913 854 aa12.59□□□□□ -0.39
PROM1-213ENST00000512304 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
PROM1-213ENST00000512304 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
PROM1-213ENST00000512304 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
PROM1-213ENST00000512304 ANKRD31Q8N7Z5 1873 aa12.58□□□□□ -0.4
PROM1-213ENST00000512304 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
PROM1-213ENST00000512304 A1BGP04217 495 aa12.57□□□□□ -0.4
PROM1-213ENST00000512304 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
PROM1-213ENST00000512304 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
PROM1-213ENST00000512304 COL4A5P29400 1685 aa12.57□□□□□ -0.4
PROM1-213ENST00000512304 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 HMOX1P09601 288 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 IL13P35225 146 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 EPS15P42566 896 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 SOX10P56693 466 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 AKAP4Q5JQC9 854 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 CCDC88AQ3V6T2 1871 aa12.56□□□□□ -0.4
PROM1-213ENST00000512304 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
PROM1-213ENST00000512304 KCNQ3O43525 872 aa12.55□□□□□ -0.4
PROM1-213ENST00000512304 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
PROM1-213ENST00000512304 DLK2Q6UY11 383 aa12.55□□□□□ -0.4
PROM1-213ENST00000512304 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
PROM1-213ENST00000512304 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
PROM1-213ENST00000512304 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 FZD9O00144 591 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 DGKZQ13574 1117 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 MTHFSDQ2M296 383 aaKnown RBP12.54□□□□□ -0.4
PROM1-213ENST00000512304 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 FER1L6Q2WGJ9 1857 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
PROM1-213ENST00000512304 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
PROM1-213ENST00000512304 SETDB2Q96T68 719 aa12.53□□□□□ -0.4
PROM1-213ENST00000512304 MRC1P22897 1456 aa12.53□□□□□ -0.4
PROM1-213ENST00000512304 NPHP1O15259 732 aa12.52□□□□□ -0.41
PROM1-213ENST00000512304 IARSP41252 1262 aaKnown RBP12.52□□□□□ -0.41
PROM1-213ENST00000512304 SCNN1DP51172 638 aa12.52□□□□□ -0.41
PROM1-213ENST00000512304 CDCA8Q53HL2 280 aa12.52□□□□□ -0.41
PROM1-213ENST00000512304 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
PROM1-213ENST00000512304 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
PROM1-213ENST00000512304 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
PROM1-213ENST00000512304 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
PROM1-213ENST00000512304 A0A087WZG4 1122 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 STARD3NLO95772 234 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 ST5P78524 1137 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 PANK3Q9H999 370 aa12.51□□□□□ -0.41
PROM1-213ENST00000512304 GPC2Q8N158 579 aa12.5□□□□□ -0.41
PROM1-213ENST00000512304 GLIS2Q9BZE0 524 aaPredicted RBP12.5□□□□□ -0.41
PROM1-213ENST00000512304 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
PROM1-213ENST00000512304 THSD7BQ9C0I4 1608 aa12.5□□□□□ -0.41
PROM1-213ENST00000512304 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
PROM1-213ENST00000512304 NPR1P16066 1061 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 ECE1P42892 770 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
PROM1-213ENST00000512304 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
PROM1-213ENST00000512304 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
PROM1-213ENST00000512304 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
PROM1-213ENST00000512304 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
PROM1-213ENST00000512304 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
PROM1-213ENST00000512304 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
PROM1-213ENST00000512304 IL6STP40189 918 aaPredicted RBP12.48□□□□□ -0.41
PROM1-213ENST00000512304 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
PROM1-213ENST00000512304 ZNF408Q9H9D4 720 aa12.48□□□□□ -0.41
PROM1-213ENST00000512304 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
PROM1-213ENST00000512304 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms