RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CAPNS2Q96L46 248 aa13.96□□□□□ -0.17
PDLIM5-217ENST00000512274 COL15A1P39059 1388 aa13.96□□□□□ -0.18
PDLIM5-217ENST00000512274 EPHX2P34913 555 aa13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 PLEKHO1Q53GL0 409 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 HACL1Q9UJ83 578 aa13.95□□□□□ -0.18
PDLIM5-217ENST00000512274 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
PDLIM5-217ENST00000512274 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
PDLIM5-217ENST00000512274 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
PDLIM5-217ENST00000512274 ZBTB1Q9Y2K1 713 aa13.94□□□□□ -0.18
PDLIM5-217ENST00000512274 AOC2O75106 756 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 PDE6BP35913 854 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 DGKZQ13574 1117 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
PDLIM5-217ENST00000512274 RNF123Q5XPI4 1314 aa13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 ECE1P42892 770 aa13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 TBC1D9BQ66K14 1250 aa13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 THSD7BQ9C0I4 1608 aa13.92□□□□□ -0.18
PDLIM5-217ENST00000512274 LTBP1Q14766 1721 aa13.91□□□□□ -0.18
PDLIM5-217ENST00000512274 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
PDLIM5-217ENST00000512274 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-217ENST00000512274 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
PDLIM5-217ENST00000512274 DDX21Q9NR30 783 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDLIM5-217ENST00000512274 NPHP1O15259 732 aa13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 SOX10P56693 466 aa13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 PRR5LQ6MZQ0 368 aa13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
PDLIM5-217ENST00000512274 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
PDLIM5-217ENST00000512274 AMOTQ4VCS5 1084 aa13.89□□□□□ -0.19
PDLIM5-217ENST00000512274 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-217ENST00000512274 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
PDLIM5-217ENST00000512274 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
PDLIM5-217ENST00000512274 ARFGEF2Q9Y6D5 1785 aa13.88□□□□□ -0.19
PDLIM5-217ENST00000512274 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
PDLIM5-217ENST00000512274 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
PDLIM5-217ENST00000512274 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-217ENST00000512274 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-217ENST00000512274 TRAF5O00463 557 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 CCDC93Q567U6 631 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 CST9Q5W186 159 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 STYK1Q6J9G0 422 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
PDLIM5-217ENST00000512274 TNRC18O15417 2968 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 SRGNP10124 158 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 MAP2K2P36507 400 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 GJA3Q9Y6H8 435 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 TLL2Q9Y6L7 1015 aa13.85□□□□□ -0.19
PDLIM5-217ENST00000512274 PRPF38BQ5VTL8 546 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-217ENST00000512274 CNBD1Q8NA66 436 aa13.84□□□□□ -0.19
PDLIM5-217ENST00000512274 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
PDLIM5-217ENST00000512274 PDE4DIPQ5VU43 2346 aa13.83□□□□□ -0.2
PDLIM5-217ENST00000512274 ST5P78524 1137 aa13.83□□□□□ -0.2
PDLIM5-217ENST00000512274 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-217ENST00000512274 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
PDLIM5-217ENST00000512274 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 A0A087WZG4 1122 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 FZD9O00144 591 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 CA12O43570 354 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 LMOD1P29536 600 aaPredicted RBP13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 EPS15P42566 896 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 EIF5P55010 431 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 CIAPIN1Q6FI81 312 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 GPC2Q8N158 579 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 C7orf43Q8WVR3 580 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
PDLIM5-217ENST00000512274 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDLIM5-217ENST00000512274 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
PDLIM5-217ENST00000512274 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
PDLIM5-217ENST00000512274 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-217ENST00000512274 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-217ENST00000512274 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 AKAP4Q5JQC9 854 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 RTKN2Q8IZC4 609 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 JDP2Q8WYK2 163 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 ZNF408Q9H9D4 720 aa13.79□□□□□ -0.2
PDLIM5-217ENST00000512274 STARD3NLO95772 234 aa13.78□□□□□ -0.2
PDLIM5-217ENST00000512274 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
PDLIM5-217ENST00000512274 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms