RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 NEUROD4Q9HD90 331 aa10.95□□□□□ -0.66
NPHP3-210ENST00000512094 NOD1Q9Y239 953 aa10.95□□□□□ -0.66
NPHP3-210ENST00000512094 EML1O00423 815 aa10.94□□□□□ -0.66
NPHP3-210ENST00000512094 TEAD4Q15561 434 aa10.94□□□□□ -0.66
NPHP3-210ENST00000512094 SLC30A3Q99726 388 aa10.94□□□□□ -0.66
NPHP3-210ENST00000512094 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-210ENST00000512094 SKIP12755 728 aa10.93□□□□□ -0.66
NPHP3-210ENST00000512094 NOS2P35228 1153 aa10.93□□□□□ -0.66
NPHP3-210ENST00000512094 FOXD4L6Q3SYB3 417 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-210ENST00000512094 FOXD4L3Q6VB84 417 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-210ENST00000512094 TNFRSF25Q93038 417 aa10.93□□□□□ -0.66
NPHP3-210ENST00000512094 KRTAP9-2Q9BYQ4 174 aa10.93□□□□□ -0.66
NPHP3-210ENST00000512094 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
NPHP3-210ENST00000512094 DYRK3O43781 588 aa10.92□□□□□ -0.66
NPHP3-210ENST00000512094 ALBP02768 609 aa10.92□□□□□ -0.66
NPHP3-210ENST00000512094 SFSWAPQ12872 951 aaKnown RBP10.92□□□□□ -0.66
NPHP3-210ENST00000512094 COL9A3Q14050 684 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-210ENST00000512094 PRDM6Q9NQX0 595 aa10.92□□□□□ -0.66
NPHP3-210ENST00000512094 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
NPHP3-210ENST00000512094 GPC6Q9Y625 555 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-210ENST00000512094 TRIM28Q13263 835 aaKnown RBP10.91□□□□□ -0.66
NPHP3-210ENST00000512094 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
NPHP3-210ENST00000512094 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
NPHP3-210ENST00000512094 SLC9A9Q8IVB4 645 aa10.91□□□□□ -0.66
NPHP3-210ENST00000512094 NACC1Q96RE7 527 aa10.91□□□□□ -0.66
NPHP3-210ENST00000512094 ADH7P40394 386 aa10.9□□□□□ -0.66
NPHP3-210ENST00000512094 EPHA4P54764 986 aa10.9□□□□□ -0.66
NPHP3-210ENST00000512094 SPEM2Q0P670 501 aa10.9□□□□□ -0.66
NPHP3-210ENST00000512094 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
NPHP3-210ENST00000512094 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
NPHP3-210ENST00000512094 NCOA4Q13772 614 aa10.89□□□□□ -0.67
NPHP3-210ENST00000512094 RAB44Q7Z6P3 723 aaPredicted RBP10.89□□□□□ -0.67
NPHP3-210ENST00000512094 KRTAP9-6A0A140TA67 174 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 SERTM1A2A2V5 107 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 LZTS3O60299 673 aaPredicted RBP10.88□□□□□ -0.67
NPHP3-210ENST00000512094 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 GRIK4Q16099 956 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 SH3PXD2AQ5TCZ1 1133 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
NPHP3-210ENST00000512094 NID1P14543 1247 aa10.87□□□□□ -0.67
NPHP3-210ENST00000512094 C7orf43Q8WVR3 580 aa10.87□□□□□ -0.67
NPHP3-210ENST00000512094 MCM6Q14566 821 aa10.85□□□□□ -0.67
NPHP3-210ENST00000512094 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
NPHP3-210ENST00000512094 NFATC2IPQ8NCF5 419 aa10.85□□□□□ -0.67
NPHP3-210ENST00000512094 ZFP64Q9NPA5 681 aa10.85□□□□□ -0.67
NPHP3-210ENST00000512094 BRD7Q9NPI1 651 aa10.85□□□□□ -0.67
NPHP3-210ENST00000512094 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
NPHP3-210ENST00000512094 DEPDC4Q8N2C3 294 aa10.84□□□□□ -0.67
NPHP3-210ENST00000512094 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
NPHP3-210ENST00000512094 USP17L5A8MUK1 530 aa10.83□□□□□ -0.68
NPHP3-210ENST00000512094 C20orf204Q6ZNR8 217 aa10.83□□□□□ -0.68
NPHP3-210ENST00000512094 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
NPHP3-210ENST00000512094 ALG2Q9H553 416 aa10.83□□□□□ -0.68
NPHP3-210ENST00000512094 TRAPPC3LQ5T215 181 aa10.82□□□□□ -0.68
NPHP3-210ENST00000512094 LILRB5O75023 590 aa10.81□□□□□ -0.68
NPHP3-210ENST00000512094 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
NPHP3-210ENST00000512094 C1orf53Q5VUE5 145 aa10.81□□□□□ -0.68
NPHP3-210ENST00000512094 ANKIB1Q9P2G1 1089 aa10.81□□□□□ -0.68
NPHP3-210ENST00000512094 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
NPHP3-210ENST00000512094 C9orf172C9J069 976 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 KCNQ4P56696 695 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 TYRO3Q06418 890 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 ADGRE1Q14246 886 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 TPCN2Q8NHX9 752 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 BHMTQ93088 406 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 TSPAN10Q9H1Z9 355 aaPredicted RBP10.8□□□□□ -0.68
NPHP3-210ENST00000512094 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 CHMP3Q9Y3E7 222 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 HCN4Q9Y3Q4 1203 aa10.8□□□□□ -0.68
NPHP3-210ENST00000512094 SFI1A8K8P3 1242 aa10.79□□□□□ -0.68
NPHP3-210ENST00000512094 TBC1D8BQ0IIM8 1120 aa10.79□□□□□ -0.68
NPHP3-210ENST00000512094 MBTPS1Q14703 1052 aa10.79□□□□□ -0.68
NPHP3-210ENST00000512094 KIAA1024Q9UPX6 916 aa10.79□□□□□ -0.68
NPHP3-210ENST00000512094 HIRAP54198 1017 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-210ENST00000512094 NBPF11Q86T75 865 aa10.78□□□□□ -0.68
NPHP3-210ENST00000512094 UBE2OQ9C0C9 1292 aaKnown RBP10.78□□□□□ -0.68
NPHP3-210ENST00000512094 A0A0A0MRY4 1105 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 H2AFB2P0C5Z0 115 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 ELNP15502 786 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 SELPP16109 830 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 ZNF280CQ8ND82 737 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 SUSD3Q96L08 255 aa10.77□□□□□ -0.69
NPHP3-210ENST00000512094 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
NPHP3-210ENST00000512094 TXNRD3Q86VQ6 643 aa10.76□□□□□ -0.69
NPHP3-210ENST00000512094 JPH1Q9HDC5 661 aaPredicted RBP10.76□□□□□ -0.69
NPHP3-210ENST00000512094 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
NPHP3-210ENST00000512094 RAC1P63000 192 aa10.75□□□□□ -0.69
NPHP3-210ENST00000512094 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
NPHP3-210ENST00000512094 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
NPHP3-210ENST00000512094 IGFLR1Q9H665 355 aa10.75□□□□□ -0.69
NPHP3-210ENST00000512094 ZBTB7BO15156 539 aaPredicted RBP10.74□□□□□ -0.69
NPHP3-210ENST00000512094 CLDN10P78369 228 aa10.74□□□□□ -0.69
NPHP3-210ENST00000512094 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
NPHP3-210ENST00000512094 SLC6A14Q9UN76 642 aa10.74□□□□□ -0.69
NPHP3-210ENST00000512094 NRG1Q02297 640 aaPredicted RBP10.73□□□□□ -0.69
NPHP3-210ENST00000512094 LRP8Q14114 963 aa10.73□□□□□ -0.69
NPHP3-210ENST00000512094 NUDT8Q8WV74 236 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms