RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SETDB2Q96T68 719 aa21.57■■□□□ 1.04
DDX41-213ENST00000512027 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
DDX41-213ENST00000512027 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
DDX41-213ENST00000512027 PIM2Q9P1W9 311 aa21.56■■□□□ 1.04
DDX41-213ENST00000512027 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
DDX41-213ENST00000512027 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
DDX41-213ENST00000512027 PDIA6Q15084 440 aa21.54■■□□□ 1.04
DDX41-213ENST00000512027 ZNF652Q9Y2D9 606 aa21.54■■□□□ 1.04
DDX41-213ENST00000512027 DALRD3Q5D0E6 543 aaKnown RBP21.53■■□□□ 1.04
DDX41-213ENST00000512027 CLEC4GQ6UXB4 293 aa21.53■■□□□ 1.04
DDX41-213ENST00000512027 C2CD5Q86YS7 1000 aa21.53■■□□□ 1.04
DDX41-213ENST00000512027 CNBD1Q8NA66 436 aa21.53■■□□□ 1.04
DDX41-213ENST00000512027 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
DDX41-213ENST00000512027 MBIPQ9NS73 344 aa21.53■■□□□ 1.04
DDX41-213ENST00000512027 NIP7Q9Y221 180 aaKnown RBP eCLIP21.53■■□□□ 1.04
DDX41-213ENST00000512027 NPHP1O15259 732 aa21.52■■□□□ 1.04
DDX41-213ENST00000512027 ARHGAP27Q6ZUM4 889 aa21.52■■□□□ 1.04
DDX41-213ENST00000512027 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.04
DDX41-213ENST00000512027 CFAP44Q96MT7 982 aa21.52■■□□□ 1.04
DDX41-213ENST00000512027 ERBB4Q15303 1308 aa21.52■■□□□ 1.03
DDX41-213ENST00000512027 MAP3K15Q6ZN16 1313 aa21.52■■□□□ 1.03
DDX41-213ENST00000512027 KIF6Q6ZMV9 814 aa21.51■■□□□ 1.03
DDX41-213ENST00000512027 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
DDX41-213ENST00000512027 TNRC6CQ9HCJ0 1690 aaKnown RBP21.5■■□□□ 1.03
DDX41-213ENST00000512027 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
DDX41-213ENST00000512027 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
DDX41-213ENST00000512027 ADCY9O60503 1353 aa21.49■■□□□ 1.03
DDX41-213ENST00000512027 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
DDX41-213ENST00000512027 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
DDX41-213ENST00000512027 H0YIN7 160 aa21.48■■□□□ 1.03
DDX41-213ENST00000512027 GPTP24298 496 aa21.48■■□□□ 1.03
DDX41-213ENST00000512027 ST5P78524 1137 aa21.48■■□□□ 1.03
DDX41-213ENST00000512027 ERVV-1B6SEH8 477 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 PDE6BP35913 854 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 AIMP1Q12904 312 aaKnown RBP21.47■■□□□ 1.03
DDX41-213ENST00000512027 HDGFL1Q5TGJ6 251 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 ZNF622Q969S3 477 aaKnown RBP eCLIP21.47■■□□□ 1.035e-9■□□□□ 10.7
DDX41-213ENST00000512027 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 CHPF2Q9P2E5 772 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
DDX41-213ENST00000512027 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 SBF1O95248 1867 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 RGL2O15211 777 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 GNAI1P63096 354 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 XAGE3Q8WTP9 111 aa21.46■■□□□ 1.03
DDX41-213ENST00000512027 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
DDX41-213ENST00000512027 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
DDX41-213ENST00000512027 TTLL6Q8N841 843 aa21.45■■□□□ 1.02
DDX41-213ENST00000512027 ZNF526Q8TF50 670 aaPredicted RBP21.45■■□□□ 1.02
DDX41-213ENST00000512027 ZNF219Q9P2Y4 722 aaPredicted RBP21.45■■□□□ 1.02
DDX41-213ENST00000512027 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.02
DDX41-213ENST00000512027 ABCC12Q96J65 1359 aa21.45■■□□□ 1.02
DDX41-213ENST00000512027 RASSF7Q02833 373 aa21.44■■□□□ 1.02
DDX41-213ENST00000512027 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
DDX41-213ENST00000512027 GIGYF2Q6Y7W6 1299 aaKnown RBP21.44■■□□□ 1.02
DDX41-213ENST00000512027 NUTM1Q86Y26 1132 aa21.44■■□□□ 1.02
DDX41-213ENST00000512027 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
DDX41-213ENST00000512027 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
DDX41-213ENST00000512027 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDX41-213ENST00000512027 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
DDX41-213ENST00000512027 TPTE2Q6XPS3 522 aa21.43■■□□□ 1.02
DDX41-213ENST00000512027 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
DDX41-213ENST00000512027 HOXB7P09629 217 aa21.42■■□□□ 1.02
DDX41-213ENST00000512027 SRGNP10124 158 aa21.42■■□□□ 1.02
DDX41-213ENST00000512027 SUSD4Q5VX71 490 aa21.42■■□□□ 1.02
DDX41-213ENST00000512027 ZNF34Q8IZ26 560 aa21.42■■□□□ 1.02
DDX41-213ENST00000512027 C8orf58Q8NAV2 365 aa21.42■■□□□ 1.02
DDX41-213ENST00000512027 ERFEQ4G0M1 354 aa21.41■■□□□ 1.02
DDX41-213ENST00000512027 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
DDX41-213ENST00000512027 GTF2E1P29083 439 aaPredicted RBP21.4■■□□□ 1.02
DDX41-213ENST00000512027 CCDC27Q2M243 656 aa21.4■■□□□ 1.02
DDX41-213ENST00000512027 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
DDX41-213ENST00000512027 FER1L6Q2WGJ9 1857 aa21.4■■□□□ 1.02
DDX41-213ENST00000512027 C21orf2O43822 256 aa21.39■■□□□ 1.01
DDX41-213ENST00000512027 PRELPP51888 382 aa21.39■■□□□ 1.01
DDX41-213ENST00000512027 TSPYL6Q8N831 410 aa21.39■■□□□ 1.01
DDX41-213ENST00000512027 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
DDX41-213ENST00000512027 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 NTSR2O95665 410 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
DDX41-213ENST00000512027 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 RNF181Q9P0P0 153 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
DDX41-213ENST00000512027 LAMB2P55268 1798 aa21.38■■□□□ 1.01
DDX41-213ENST00000512027 IBTKQ9P2D0 1353 aaPredicted RBP21.37■■□□□ 1.01
DDX41-213ENST00000512027 NFKBIEO00221 500 aa21.37■■□□□ 1.01
DDX41-213ENST00000512027 NYXQ9GZU5 481 aa21.37■■□□□ 1.01
DDX41-213ENST00000512027 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
DDX41-213ENST00000512027 PHAXQ9H814 394 aaKnown RBP21.36■■□□□ 1.01
DDX41-213ENST00000512027 GPBP1L1Q9HC44 474 aaPredicted RBP21.36■■□□□ 1.01
DDX41-213ENST00000512027 NPR1P16066 1061 aa21.35■■□□□ 1.01
DDX41-213ENST00000512027 C3orf67Q6ZVT6 689 aa21.35■■□□□ 1.01
DDX41-213ENST00000512027 CNKSR1Q969H4 720 aa21.35■■□□□ 1.01
DDX41-213ENST00000512027 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
DDX41-213ENST00000512027 PARP10Q53GL7 1025 aa21.34■■□□□ 1.01
DDX41-213ENST00000512027 OLFM4Q6UX06 510 aa21.34■■□□□ 1.01
DDX41-213ENST00000512027 HYPKQ9NX55 129 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms