RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
RAB28-207ENST00000511649 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
RAB28-207ENST00000511649 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
RAB28-207ENST00000511649 PPIP5K1Q6PFW1 1433 aa9.37□□□□□ -0.91
RAB28-207ENST00000511649 NUP188Q5SRE5 1749 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 SPATA31A1Q5TZJ5 1347 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 LRRC37A3O60309 1634 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 MTMR2Q13614 643 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 SKIV2LQ15477 1246 aaKnown RBP9.36□□□□□ -0.91
RAB28-207ENST00000511649 NBPF8Q3BBV2 869 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 NGDNQ8NEJ9 315 aaKnown RBP9.36□□□□□ -0.91
RAB28-207ENST00000511649 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
RAB28-207ENST00000511649 COL5A2P05997 1499 aaPredicted RBP9.35□□□□□ -0.91
RAB28-207ENST00000511649 DISP2A7MBM2 1401 aa9.35□□□□□ -0.91
RAB28-207ENST00000511649 USP6P35125 1406 aa9.35□□□□□ -0.91
RAB28-207ENST00000511649 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
RAB28-207ENST00000511649 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
RAB28-207ENST00000511649 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
RAB28-207ENST00000511649 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
RAB28-207ENST00000511649 PRDM11Q9NQV5 511 aa9.35□□□□□ -0.91
RAB28-207ENST00000511649 PARP4Q9UKK3 1724 aaKnown RBP9.35□□□□□ -0.91
RAB28-207ENST00000511649 CCDC9Q9Y3X0 531 aaKnown RBP9.35□□□□□ -0.91
RAB28-207ENST00000511649 CENPJQ9HC77 1338 aaPredicted RBP9.34□□□□□ -0.91
RAB28-207ENST00000511649 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
RAB28-207ENST00000511649 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
RAB28-207ENST00000511649 NFAT5O94916 1531 aa9.34□□□□□ -0.91
RAB28-207ENST00000511649 CPDO75976 1380 aa9.34□□□□□ -0.91
RAB28-207ENST00000511649 CD163L1Q9NR16 1453 aa9.34□□□□□ -0.91
RAB28-207ENST00000511649 MON2Q7Z3U7 1717 aa9.34□□□□□ -0.92
RAB28-207ENST00000511649 SBF2Q86WG5 1849 aa9.33□□□□□ -0.92
RAB28-207ENST00000511649 SPDYE5A6NIY4 337 aa9.33□□□□□ -0.92
RAB28-207ENST00000511649 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
RAB28-207ENST00000511649 MMP16P51512 607 aa9.33□□□□□ -0.92
RAB28-207ENST00000511649 QPCTQ16769 361 aa9.33□□□□□ -0.92
RAB28-207ENST00000511649 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
RAB28-207ENST00000511649 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
RAB28-207ENST00000511649 USP54Q70EL1 1684 aa9.32□□□□□ -0.92
RAB28-207ENST00000511649 LILRB3O75022 631 aa9.32□□□□□ -0.92
RAB28-207ENST00000511649 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
RAB28-207ENST00000511649 ANKLE1Q8NAG6 615 aa9.32□□□□□ -0.92
RAB28-207ENST00000511649 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
RAB28-207ENST00000511649 STRN4Q9NRL3 753 aa9.32□□□□□ -0.92
RAB28-207ENST00000511649 JUNDP17535 347 aa9.31□□□□□ -0.92
RAB28-207ENST00000511649 PTF1AQ7RTS3 328 aa9.31□□□□□ -0.92
RAB28-207ENST00000511649 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
RAB28-207ENST00000511649 PRR7Q8TB68 274 aa9.31□□□□□ -0.92
RAB28-207ENST00000511649 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
RAB28-207ENST00000511649 MYT1Q01538 1121 aa9.3□□□□□ -0.92
RAB28-207ENST00000511649 EZH2Q15910 746 aaKnown RBP9.3□□□□□ -0.92
RAB28-207ENST00000511649 CAMKK2Q96RR4 588 aa9.3□□□□□ -0.92
RAB28-207ENST00000511649 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
RAB28-207ENST00000511649 USP35Q9P2H5 1018 aa9.3□□□□□ -0.92
RAB28-207ENST00000511649 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
RAB28-207ENST00000511649 CFAP99D6REC4 459 aa9.29□□□□□ -0.92
RAB28-207ENST00000511649 GCP02774 474 aa9.29□□□□□ -0.92
RAB28-207ENST00000511649 SRPK2P78362 688 aaKnown RBP9.29□□□□□ -0.92
RAB28-207ENST00000511649 ABTB2Q8N961 1025 aa9.29□□□□□ -0.92
RAB28-207ENST00000511649 TRIM37O94972 964 aa9.28□□□□□ -0.92
RAB28-207ENST00000511649 DESI1Q6ICB0 168 aa9.28□□□□□ -0.92
RAB28-207ENST00000511649 Q6ZNB5 142 aa9.28□□□□□ -0.92
RAB28-207ENST00000511649 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
RAB28-207ENST00000511649 ROCK2O75116 1388 aaKnown RBP9.27□□□□□ -0.93
RAB28-207ENST00000511649 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
RAB28-207ENST00000511649 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
RAB28-207ENST00000511649 CRB1P82279 1406 aa9.27□□□□□ -0.93
RAB28-207ENST00000511649 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
RAB28-207ENST00000511649 LTN1O94822 1766 aa9.27□□□□□ -0.93
RAB28-207ENST00000511649 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
RAB28-207ENST00000511649 CASZ1Q86V15 1759 aa9.27□□□□□ -0.93
RAB28-207ENST00000511649 AATKQ6ZMQ8 1374 aa9.26□□□□□ -0.93
RAB28-207ENST00000511649 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
RAB28-207ENST00000511649 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
RAB28-207ENST00000511649 R3HDM1Q15032 1099 aaKnown RBP9.26□□□□□ -0.93
RAB28-207ENST00000511649 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
RAB28-207ENST00000511649 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
RAB28-207ENST00000511649 BAG6P46379 1132 aa9.25□□□□□ -0.93
RAB28-207ENST00000511649 PTPRNQ16849 979 aa9.25□□□□□ -0.93
RAB28-207ENST00000511649 TCP11L2Q8N4U5 519 aa9.25□□□□□ -0.93
RAB28-207ENST00000511649 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
RAB28-207ENST00000511649 PRKD2Q9BZL6 878 aa9.25□□□□□ -0.93
RAB28-207ENST00000511649 UTRNP46939 3433 aa9.25□□□□□ -0.93
RAB28-207ENST00000511649 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
RAB28-207ENST00000511649 ARHGEF25Q86VW2 580 aa9.24□□□□□ -0.93
RAB28-207ENST00000511649 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
RAB28-207ENST00000511649 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 ABCC6O95255 1503 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
RAB28-207ENST00000511649 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
RAB28-207ENST00000511649 TSC1Q92574 1164 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 V9GY48 417 aaPredicted RBP9.23□□□□□ -0.93
RAB28-207ENST00000511649 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
RAB28-207ENST00000511649 FAM208AQ9UK61 1670 aaKnown RBP9.23□□□□□ -0.93
RAB28-207ENST00000511649 OVOS2A0A0J9YW53 1432 aa9.22□□□□□ -0.93
RAB28-207ENST00000511649 OVOS2Q6IE36 1432 aa9.22□□□□□ -0.93
RAB28-207ENST00000511649 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
RAB28-207ENST00000511649 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms