RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 MAP3K15Q6ZN16 1313 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 ZNF521Q96K83 1311 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 ANXA1P04083 346 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 SERPINB2P05120 415 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 TGFB2P61812 414 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 HLFQ16534 295 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 TWISTNBQ3B726 338 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 CCDC30Q5VVM6 783 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 TTLL7Q6ZT98 887 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 NLGN2Q8NFZ4 835 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
PDLIM5-215ENST00000511586 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-215ENST00000511586 XAGE3Q8WTP9 111 aa9.22□□□□□ -0.93
PDLIM5-215ENST00000511586 ZBTB3Q9H5J0 574 aa9.22□□□□□ -0.93
PDLIM5-215ENST00000511586 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDLIM5-215ENST00000511586 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
PDLIM5-215ENST00000511586 E9PSI1 815 aa9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 NPHP1O15259 732 aa9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 VAMP4O75379 141 aa9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 STK31Q9BXU1 1019 aa9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.94
PDLIM5-215ENST00000511586 SCN7AQ01118 1682 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 A0A0G2JLW4 131 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 SLFN5Q08AF3 891 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 GPR162Q16538 588 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 TPTE2Q6XPS3 522 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 ANKRD13DQ6ZTN6 518 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 CNBD1Q8NA66 436 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 PLBD2Q8NHP8 589 aa9.2□□□□□ -0.94
PDLIM5-215ENST00000511586 GPTP24298 496 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 GTF2E1P29083 439 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 ST5P78524 1137 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 PRR5LQ6MZQ0 368 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 ZNF34Q8IZ26 560 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 NYXQ9GZU5 481 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 PHAXQ9H814 394 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 ATP10DQ9P241 1426 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 BCORQ6W2J9 1755 aa9.19□□□□□ -0.94
PDLIM5-215ENST00000511586 PXDNLA1KZ92 1463 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 FAM177BA6PVY3 158 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 DDX58O95786 925 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 SLC4A2P04920 1241 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 DPEP1P16444 411 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 PDE6BP35913 854 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 HNRNPUQ00839 825 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 TCIRG1Q13488 830 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 PARP10Q53GL7 1025 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 PPP1R42Q7Z4L9 355 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 PIM2Q9P1W9 311 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
PDLIM5-215ENST00000511586 UBN2Q6ZU65 1347 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 H0YIN7 160 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 KCNA3P22001 575 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 CHRNA5P30532 468 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 KIF13BQ9NQT8 1826 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 NRXN2Q9P2S2 1712 aa9.17□□□□□ -0.94
PDLIM5-215ENST00000511586 IBTKQ9P2D0 1353 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 YBX3P16989 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 KSR2Q6VAB6 950 aa9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 NLRP10Q86W26 655 aa9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 UTP14AQ9BVJ6 771 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 WWC3Q9ULE0 1092 aa9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 BCS1LQ9Y276 419 aa9.16□□□□□ -0.94
PDLIM5-215ENST00000511586 PI4KAP2A4QPH2 592 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 NTSR2O95665 410 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 FLIIQ13045 1269 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 DALRD3Q5D0E6 543 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 G2E3Q7L622 706 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 PI4KAP1Q8N8J0 262 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 ZNF622Q969S3 477 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 ZNF428Q96B54 188 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 ISCA1Q9BUE6 129 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 METTL22Q9BUU2 404 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 MAP3K2Q9Y2U5 619 aa9.15□□□□□ -0.94
PDLIM5-215ENST00000511586 AFDNP55196 1824 aaKnown RBP9.15□□□□□ -0.95
PDLIM5-215ENST00000511586 RNF123Q5XPI4 1314 aa9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 KLRG2A4D1S0 409 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-215ENST00000511586 CT47B1P0C2W7 299 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms