RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 NDFIP2Q9NV92 336 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 CABP1Q9NZU7 370 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 SCHIP1Q9P0W5 487 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 NOVA2Q9UNW9 492 aaKnown RBP7.89□□□□□ -1.15
HMGB3P13-201ENST00000511263 BMP4P12644 408 aa7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 TATP17735 454 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 ATXN7L1Q9ULK2 861 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 KIAA1024Q9UPX6 916 aa7.88□□□□□ -1.15
HMGB3P13-201ENST00000511263 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 FGFR3P22607 806 aa7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 AMPD1P23109 780 aa7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 PSMA6P60900 246 aaKnown RBP7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 LBRQ14739 615 aaKnown RBP7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 HCN2Q9UL51 889 aa7.87□□□□□ -1.15
HMGB3P13-201ENST00000511263 SFI1A8K8P3 1242 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 HIF1AQ16665 826 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 CDCA8Q53HL2 280 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 EFHC2Q5JST6 749 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 SLCO4C1Q6ZQN7 724 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 ZDHHC3Q9NYG2 299 aa7.86□□□□□ -1.15
HMGB3P13-201ENST00000511263 SERTM1A2A2V5 107 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 TEAD4Q15561 434 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 SLC9A9Q8IVB4 645 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 STAG2Q8N3U4 1231 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 VTI1AQ96AJ9 217 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 BTBD6Q96KE9 485 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 ZNF232Q9UNY5 417 aa7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 GPC6Q9Y625 555 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P13-201ENST00000511263 PPP1R12BO60237 982 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 EPXP11678 715 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 PLA2G4AP47712 749 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 Q8N3U1 123 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 TSEN2Q8NCE0 465 aaKnown RBP7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 ARID3AQ99856 593 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 C1orf115Q9H7X2 142 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 NEUROD4Q9HD90 331 aa7.84□□□□□ -1.15
HMGB3P13-201ENST00000511263 NEURL1BA8MQ27 555 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 ATP4AP20648 1035 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 IGFBP4P22692 258 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 NOS2P35228 1153 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 EPHA4P54764 986 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 SRPK2P78362 688 aaKnown RBP7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 FIGNL1Q6PIW4 674 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 CD163Q86VB7 1156 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 ZCCHC2Q9C0B9 1178 aaKnown RBP7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 IQSEC3Q9UPP2 1182 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 GJA3Q9Y6H8 435 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 ATAD2Q6PL18 1390 aa7.83□□□□□ -1.16
HMGB3P13-201ENST00000511263 FOXO3O43524 673 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 DKK1O94907 266 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 CHRNA4P43681 627 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 DGKGP49619 791 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 ARXQ96QS3 562 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
HMGB3P13-201ENST00000511263 GNB5O14775 395 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 ITGB7P26010 798 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 HIRAP54198 1017 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 ARSJQ5FYB0 599 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 B4GALNT3Q6L9W6 998 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 BICDL1Q6ZP65 573 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 SCG3Q8WXD2 468 aaKnown RBP7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
HMGB3P13-201ENST00000511263 ARAFP10398 606 aa7.8□□□□□ -1.16
HMGB3P13-201ENST00000511263 CHMP7Q8WUX9 453 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P13-201ENST00000511263 USTQ9Y2C2 406 aa7.8□□□□□ -1.16
HMGB3P13-201ENST00000511263 PCDHGC4Q9Y5F7 938 aa7.8□□□□□ -1.16
HMGB3P13-201ENST00000511263 DCDC2BA2VCK2 349 aa7.79□□□□□ -1.16
HMGB3P13-201ENST00000511263 CD33P20138 364 aa7.79□□□□□ -1.16
HMGB3P13-201ENST00000511263 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
HMGB3P13-201ENST00000511263 CHSY3Q70JA7 882 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 FCHSD1Q86WN1 690 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 ZNF295-AS1Q8N0V1 137 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 MTMR7Q9Y216 660 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 USP3Q9Y6I4 520 aa7.78□□□□□ -1.16
HMGB3P13-201ENST00000511263 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 PTCD1O75127 700 aaKnown RBP7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 MAPTP10636 758 aaKnown RBP7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 WEE1P30291 646 aa7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 TNP2Q05952 138 aa7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 RHPN1Q8TCX5 695 aa7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 CLP1Q92989 425 aaKnown RBP7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
HMGB3P13-201ENST00000511263 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
HMGB3P13-201ENST00000511263 EML1O00423 815 aa7.76□□□□□ -1.17
HMGB3P13-201ENST00000511263 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
HMGB3P13-201ENST00000511263 C2orf49Q9BVC5 232 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P13-201ENST00000511263 KHNYNO15037 678 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms