RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CTDP1Q9Y5B0 961 aaPredicted RBP3.62□□□□□ -1.83
CLOCK-209ENST00000511124 MAST3O60307 1309 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 MS4A1P11836 297 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 PHKG2P15735 406 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 PRELPP51888 382 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 RALBP1Q15311 655 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 DPP8Q6V1X1 898 aaPredicted RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 COL23A1Q86Y22 540 aaPredicted RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 ZC3H15Q8WU90 426 aaKnown RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 DDRGK1Q96HY6 314 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 HTATIP2Q9BUP3 242 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 UTP14AQ9BVJ6 771 aaKnown RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 ANKRD2Q9GZV1 360 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 NIP7Q9Y221 180 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 CCDC85CA6NKD9 419 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 NKX1-1Q15270 411 aaPredicted RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 TAF7Q15545 349 aaPredicted RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 NKX2-3Q8TAU0 364 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 FBXW7Q969H0 707 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 AKT1S1Q96B36 256 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 RRAGCQ9HB90 399 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 GLRX3O76003 335 aaKnown RBP3.61□□□□□ -1.83
CLOCK-209ENST00000511124 CCDC152Q4G0S7 254 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 ATF7IPQ6VMQ6 1270 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 MPNDQ8N594 471 aa3.61□□□□□ -1.83
CLOCK-209ENST00000511124 NCAPD2Q15021 1401 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 CAMTA1Q9Y6Y1 1673 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 SPDYE4A6NLX3 237 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 DPEP1P16444 411 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 CRKLP46109 303 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 NUBP1P53384 320 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 PRMT2P55345 433 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 FKBP4Q02790 459 aaKnown RBP eCLIP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 RRS1Q15050 365 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 DCAF15Q66K64 600 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 RIC3Q7Z5B4 369 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 ERO1AQ96HE7 468 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 MPHOSPH8Q99549 860 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 BIN2Q9UBW5 565 aaPredicted RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 UBXN2AP68543 259 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 LRRFIP1Q32MZ4 808 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 ERVV-1B6SEH8 477 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 EPHX2P34913 555 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 GNAI1P63096 354 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 APOBEC3FQ8IUX4 373 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 SLC52A2Q9HAB3 445 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 ADARB2Q9NS39 739 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 TSPYL4Q9UJ04 414 aa3.6□□□□□ -1.83
CLOCK-209ENST00000511124 RRP7AQ9Y3A4 280 aaKnown RBP3.6□□□□□ -1.83
CLOCK-209ENST00000511124 A0A1W2PP64 1363 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 PPLO60437 1756 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 HSPA1AP0DMV8 641 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 HSPA1BP0DMV9 641 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 IARSP41252 1262 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 NFE2L2Q16236 605 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 HELBQ8NG08 1087 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 ZNF408Q9H9D4 720 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 HYPKQ9NX55 129 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 SLC5A4Q9NY91 659 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 ANKIB1Q9P2G1 1089 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 PRKAG2Q9UGJ0 569 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 CSADQ9Y600 493 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 NALCNQ8IZF0 1738 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 PNPLA7Q6ZV29 1317 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 LTBP3Q9NS15 1303 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 RNMTO43148 476 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 ANP32CO43423 234 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 IREB2P48200 963 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 GORABQ5T7V8 394 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 CCDC30Q5VVM6 783 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 GPC2Q8N158 579 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 CRAMP1Q96RY5 1269 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 TSPYL2Q9H2G4 693 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 PANK3Q9H999 370 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 TRMT112Q9UI30 125 aaKnown RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 KIAA1210Q9ULL0 1709 aa3.59□□□□□ -1.83
CLOCK-209ENST00000511124 ZBTB12Q9Y330 459 aaPredicted RBP3.59□□□□□ -1.83
CLOCK-209ENST00000511124 QRICH2Q9H0J4 1663 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 PITPNM1O00562 1244 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 FYB1O15117 783 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 LDHCP07864 332 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 ATP2B4P23634 1241 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 CNGB1Q14028 1251 aaPredicted RBP3.59□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF710Q8N1W2 664 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 ZGPATQ8N5A5 531 aaKnown RBP3.59□□□□□ -1.84
CLOCK-209ENST00000511124 ARHGEF1Q92888 912 aaKnown RBP3.59□□□□□ -1.84
CLOCK-209ENST00000511124 SIN3AQ96ST3 1273 aa3.59□□□□□ -1.84
CLOCK-209ENST00000511124 MTIF3Q9H2K0 278 aaKnown RBP3.59□□□□□ -1.84
CLOCK-209ENST00000511124 USPL1Q5W0Q7 1092 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 ANKRD18AQ8IVF6 992 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 USHBP1Q8N6Y0 703 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 PIGBQ92521 554 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 LAS1LQ9Y4W2 734 aaKnown RBP3.58□□□□□ -1.84
CLOCK-209ENST00000511124 A0A0G2JLW4 131 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 UNCXA6NJT0 531 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 RBM5P52756 815 aaKnown RBP eCLIP3.58□□□□□ -1.84
CLOCK-209ENST00000511124 SLC4A8Q2Y0W8 1093 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF804AQ7Z570 1209 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 EYA1Q99502 592 aa3.58□□□□□ -1.84
CLOCK-209ENST00000511124 GGA1Q9UJY5 639 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms