RNA–Protein interactions for RNA: ENST00000510993.1

RPS3A-209, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-209ENST00000510993 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
RPS3A-209ENST00000510993 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 HOXD11P31277 338 aaPredicted RBP17.18■□□□□ 0.34
RPS3A-209ENST00000510993 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
RPS3A-209ENST00000510993 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
RPS3A-209ENST00000510993 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
RPS3A-209ENST00000510993 STYK1Q6J9G0 422 aa17.17■□□□□ 0.34
RPS3A-209ENST00000510993 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
RPS3A-209ENST00000510993 C21orf2O43822 256 aa17.16■□□□□ 0.34
RPS3A-209ENST00000510993 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
RPS3A-209ENST00000510993 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
RPS3A-209ENST00000510993 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
RPS3A-209ENST00000510993 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
RPS3A-209ENST00000510993 MCM10Q7L590 875 aa17.15■□□□□ 0.34
RPS3A-209ENST00000510993 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
RPS3A-209ENST00000510993 HTATSF1O43719 755 aaKnown RBP17.14■□□□□ 0.33
RPS3A-209ENST00000510993 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
RPS3A-209ENST00000510993 SCN4AP35499 1836 aa17.13■□□□□ 0.33
RPS3A-209ENST00000510993 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
RPS3A-209ENST00000510993 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPS3A-209ENST00000510993 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
RPS3A-209ENST00000510993 TAOK3Q9H2K8 898 aa17.13■□□□□ 0.33
RPS3A-209ENST00000510993 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
RPS3A-209ENST00000510993 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
RPS3A-209ENST00000510993 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
RPS3A-209ENST00000510993 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
RPS3A-209ENST00000510993 L3MBTL3Q96JM7 780 aaPredicted RBP17.12■□□□□ 0.33
RPS3A-209ENST00000510993 CFAP53Q96M91 514 aa17.12■□□□□ 0.33
RPS3A-209ENST00000510993 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
RPS3A-209ENST00000510993 COL4A5P29400 1685 aa17.12■□□□□ 0.33
RPS3A-209ENST00000510993 NUP98P52948 1817 aa17.12■□□□□ 0.33
RPS3A-209ENST00000510993 ERFEQ4G0M1 354 aa17.11■□□□□ 0.33
RPS3A-209ENST00000510993 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
RPS3A-209ENST00000510993 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
RPS3A-209ENST00000510993 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
RPS3A-209ENST00000510993 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
RPS3A-209ENST00000510993 KCNA4P22459 653 aa17.1■□□□□ 0.33
RPS3A-209ENST00000510993 ST5P78524 1137 aa17.1■□□□□ 0.33
RPS3A-209ENST00000510993 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPS3A-209ENST00000510993 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
RPS3A-209ENST00000510993 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
RPS3A-209ENST00000510993 HLFQ16534 295 aa17.09■□□□□ 0.33
RPS3A-209ENST00000510993 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
RPS3A-209ENST00000510993 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
RPS3A-209ENST00000510993 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
RPS3A-209ENST00000510993 IBTKQ9P2D0 1353 aaPredicted RBP17.09■□□□□ 0.33
RPS3A-209ENST00000510993 NPR1P16066 1061 aa17.08■□□□□ 0.32
RPS3A-209ENST00000510993 SOGA3Q5TF21 947 aa17.08■□□□□ 0.32
RPS3A-209ENST00000510993 NBPF5PQ86XG9 351 aaPredicted RBP17.08■□□□□ 0.32
RPS3A-209ENST00000510993 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
RPS3A-209ENST00000510993 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
RPS3A-209ENST00000510993 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
RPS3A-209ENST00000510993 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
RPS3A-209ENST00000510993 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
RPS3A-209ENST00000510993 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
RPS3A-209ENST00000510993 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
RPS3A-209ENST00000510993 LRP10Q7Z4F1 713 aa17.06■□□□□ 0.32
RPS3A-209ENST00000510993 ZNF652Q9Y2D9 606 aa17.06■□□□□ 0.32
RPS3A-209ENST00000510993 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
RPS3A-209ENST00000510993 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPS3A-209ENST00000510993 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
RPS3A-209ENST00000510993 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
RPS3A-209ENST00000510993 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
RPS3A-209ENST00000510993 NIP7Q9Y221 180 aaKnown RBP eCLIP17.05■□□□□ 0.323e-23■□□□□ 10.2
RPS3A-209ENST00000510993 UBN2Q6ZU65 1347 aa17.04■□□□□ 0.32
RPS3A-209ENST00000510993 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
RPS3A-209ENST00000510993 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
RPS3A-209ENST00000510993 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
RPS3A-209ENST00000510993 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
RPS3A-209ENST00000510993 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
RPS3A-209ENST00000510993 FZD9O00144 591 aa17.03■□□□□ 0.32
RPS3A-209ENST00000510993 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
RPS3A-209ENST00000510993 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
RPS3A-209ENST00000510993 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
RPS3A-209ENST00000510993 ITGBL1O95965 494 aaPredicted RBP17.02■□□□□ 0.32
RPS3A-209ENST00000510993 HSPA1AP0DMV8 641 aaKnown RBP17.02■□□□□ 0.32
RPS3A-209ENST00000510993 HSPA1BP0DMV9 641 aaKnown RBP17.02■□□□□ 0.32
RPS3A-209ENST00000510993 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
RPS3A-209ENST00000510993 SLC51AQ86UW1 340 aa17.02■□□□□ 0.32
RPS3A-209ENST00000510993 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
RPS3A-209ENST00000510993 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
RPS3A-209ENST00000510993 TTLL7Q6ZT98 887 aa17.01■□□□□ 0.31
RPS3A-209ENST00000510993 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
RPS3A-209ENST00000510993 PSMD1Q99460 953 aa17.01■□□□□ 0.31
RPS3A-209ENST00000510993 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
RPS3A-209ENST00000510993 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
RPS3A-209ENST00000510993 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
RPS3A-209ENST00000510993 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
RPS3A-209ENST00000510993 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
RPS3A-209ENST00000510993 LAMB2P55268 1798 aa17■□□□□ 0.31
RPS3A-209ENST00000510993 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
RPS3A-209ENST00000510993 NTSR2O95665 410 aa16.99■□□□□ 0.31
RPS3A-209ENST00000510993 PDIA6Q15084 440 aa16.99■□□□□ 0.31
RPS3A-209ENST00000510993 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
RPS3A-209ENST00000510993 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
RPS3A-209ENST00000510993 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms