RNA–Protein interactions for RNA: ENST00000510817.1

TMEM173-208, Transcript of transmembrane protein 173, humanhuman

TSL 2

Gene TMEM173, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-208ENST00000510817 IL17REQ8NFR9 667 aa18.53■□□□□ 0.56
TMEM173-208ENST00000510817 SETDB2Q96T68 719 aa18.53■□□□□ 0.56
TMEM173-208ENST00000510817 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
TMEM173-208ENST00000510817 TMEM88BA6NKF7 163 aa18.52■□□□□ 0.56
TMEM173-208ENST00000510817 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
TMEM173-208ENST00000510817 CNBD1Q8NA66 436 aa18.52■□□□□ 0.56
TMEM173-208ENST00000510817 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
TMEM173-208ENST00000510817 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
TMEM173-208ENST00000510817 RASSF10A6NK89 507 aa18.5■□□□□ 0.55
TMEM173-208ENST00000510817 A1BGP04217 495 aa18.5■□□□□ 0.55
TMEM173-208ENST00000510817 BCORQ6W2J9 1755 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 DIAPH1O60610 1272 aaKnown RBP18.48■□□□□ 0.55
TMEM173-208ENST00000510817 ST5P78524 1137 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
TMEM173-208ENST00000510817 RGL2O15211 777 aa18.47■□□□□ 0.55
TMEM173-208ENST00000510817 PER1O15534 1290 aaPredicted RBP18.47■□□□□ 0.55
TMEM173-208ENST00000510817 LBX1P52954 281 aa18.47■□□□□ 0.55
TMEM173-208ENST00000510817 FKBP4Q02790 459 aaKnown RBP eCLIP18.47■□□□□ 0.55
TMEM173-208ENST00000510817 FMNL2Q96PY5 1086 aa18.47■□□□□ 0.55
TMEM173-208ENST00000510817 ZNF541Q9H0D2 1346 aa18.47■□□□□ 0.55
TMEM173-208ENST00000510817 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
TMEM173-208ENST00000510817 FZD9O00144 591 aa18.46■□□□□ 0.55
TMEM173-208ENST00000510817 HSPA8P11142 646 aaKnown RBP18.46■□□□□ 0.55
TMEM173-208ENST00000510817 NPR1P16066 1061 aa18.46■□□□□ 0.55
TMEM173-208ENST00000510817 HACL1Q9UJ83 578 aa18.46■□□□□ 0.55
TMEM173-208ENST00000510817 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
TMEM173-208ENST00000510817 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
TMEM173-208ENST00000510817 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.54
TMEM173-208ENST00000510817 EPHX2P34913 555 aa18.45■□□□□ 0.54
TMEM173-208ENST00000510817 TEFQ10587 303 aa18.45■□□□□ 0.54
TMEM173-208ENST00000510817 PNMA8AQ86V59 439 aaPredicted RBP18.45■□□□□ 0.54
TMEM173-208ENST00000510817 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
TMEM173-208ENST00000510817 DEFB115Q30KQ5 88 aa18.44■□□□□ 0.54
TMEM173-208ENST00000510817 CNTROBQ8N137 903 aa18.44■□□□□ 0.54
TMEM173-208ENST00000510817 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
TMEM173-208ENST00000510817 ABHD8Q96I13 439 aa18.44■□□□□ 0.54
TMEM173-208ENST00000510817 ZNF277Q9NRM2 450 aaPredicted RBP18.44■□□□□ 0.54
TMEM173-208ENST00000510817 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
TMEM173-208ENST00000510817 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
TMEM173-208ENST00000510817 KCNQ3O43525 872 aa18.43■□□□□ 0.54
TMEM173-208ENST00000510817 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
TMEM173-208ENST00000510817 RGS19P49795 217 aa18.42■□□□□ 0.54
TMEM173-208ENST00000510817 MAP2K1Q02750 393 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-208ENST00000510817 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-208ENST00000510817 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-208ENST00000510817 WDR33Q9C0J8 1336 aaKnown RBP18.42■□□□□ 0.54
TMEM173-208ENST00000510817 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
TMEM173-208ENST00000510817 MAP1SQ66K74 1059 aaPredicted RBP18.41■□□□□ 0.54
TMEM173-208ENST00000510817 OLFM4Q6UX06 510 aa18.41■□□□□ 0.54
TMEM173-208ENST00000510817 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
TMEM173-208ENST00000510817 GPC2Q8N158 579 aa18.41■□□□□ 0.54
TMEM173-208ENST00000510817 NPHP1O15259 732 aa18.4■□□□□ 0.54
TMEM173-208ENST00000510817 IARSP41252 1262 aaKnown RBP18.4■□□□□ 0.54
TMEM173-208ENST00000510817 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
TMEM173-208ENST00000510817 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
TMEM173-208ENST00000510817 RNF123Q5XPI4 1314 aa18.4■□□□□ 0.54
TMEM173-208ENST00000510817 BTBD11A6QL63 1104 aa18.39■□□□□ 0.53
TMEM173-208ENST00000510817 SYNE4Q8N205 404 aa18.39■□□□□ 0.53
TMEM173-208ENST00000510817 PSMD1Q99460 953 aa18.39■□□□□ 0.53
TMEM173-208ENST00000510817 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
TMEM173-208ENST00000510817 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
TMEM173-208ENST00000510817 ALDH1B1P30837 517 aa18.38■□□□□ 0.53
TMEM173-208ENST00000510817 DDX21Q9NR30 783 aaKnown RBP eCLIP18.38■□□□□ 0.53
TMEM173-208ENST00000510817 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 NBPF26B4DH59 902 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 PIP4K2AP48426 406 aaPredicted RBP18.37■□□□□ 0.53
TMEM173-208ENST00000510817 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 CRY2Q49AN0 593 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 NBPF10Q6P3W6 841 aaKnown RBP18.37■□□□□ 0.53
TMEM173-208ENST00000510817 NBPF15Q8N660 670 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
TMEM173-208ENST00000510817 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
TMEM173-208ENST00000510817 COL4A5P29400 1685 aa18.36■□□□□ 0.53
TMEM173-208ENST00000510817 LTBP1Q14766 1721 aa18.36■□□□□ 0.53
TMEM173-208ENST00000510817 KIF7Q2M1P5 1343 aa18.36■□□□□ 0.53
TMEM173-208ENST00000510817 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
TMEM173-208ENST00000510817 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
TMEM173-208ENST00000510817 CST9Q5W186 159 aa18.34■□□□□ 0.53
TMEM173-208ENST00000510817 CC2D2BQ6DHV5 1058 aa18.34■□□□□ 0.53
TMEM173-208ENST00000510817 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
TMEM173-208ENST00000510817 SCNN1DP51172 638 aa18.33■□□□□ 0.52
TMEM173-208ENST00000510817 HLFQ16534 295 aa18.33■□□□□ 0.52
TMEM173-208ENST00000510817 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
TMEM173-208ENST00000510817 CAPNS2Q96L46 248 aa18.33■□□□□ 0.52
TMEM173-208ENST00000510817 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
TMEM173-208ENST00000510817 ABT1Q9ULW3 272 aaKnown RBP18.33■□□□□ 0.52
TMEM173-208ENST00000510817 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
TMEM173-208ENST00000510817 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
TMEM173-208ENST00000510817 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
TMEM173-208ENST00000510817 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
TMEM173-208ENST00000510817 ECE1P42892 770 aa18.31■□□□□ 0.52
TMEM173-208ENST00000510817 GRIPAP1Q4V328 841 aa18.31■□□□□ 0.52
TMEM173-208ENST00000510817 USP50Q70EL3 339 aaPredicted RBP18.31■□□□□ 0.52
TMEM173-208ENST00000510817 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
TMEM173-208ENST00000510817 TLL2Q9Y6L7 1015 aa18.31■□□□□ 0.52
TMEM173-208ENST00000510817 MAP2K2P36507 400 aa18.3■□□□□ 0.52
TMEM173-208ENST00000510817 EPS15P42566 896 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms