RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
RFC1-212ENST00000510783 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
RFC1-212ENST00000510783 PHF20L1A8MW92 1017 aa10.15□□□□□ -0.78
RFC1-212ENST00000510783 SEC13P55735 322 aa10.15□□□□□ -0.78
RFC1-212ENST00000510783 SNRPNP63162 240 aaKnown RBP10.15□□□□□ -0.78
RFC1-212ENST00000510783 FAM182BQ5T319 152 aa10.15□□□□□ -0.78
RFC1-212ENST00000510783 NEUROD4Q9HD90 331 aa10.15□□□□□ -0.78
RFC1-212ENST00000510783 CHMP3Q9Y3E7 222 aa10.15□□□□□ -0.78
RFC1-212ENST00000510783 CC2D2AQ9P2K1 1620 aa10.15□□□□□ -0.79
RFC1-212ENST00000510783 NEURL1BA8MQ27 555 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 C21orf2O43822 256 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 PPP1R12BO60237 982 aaPredicted RBP10.14□□□□□ -0.79
RFC1-212ENST00000510783 ARAFP10398 606 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 PTK7Q13308 1070 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 SLCO4C1Q6ZQN7 724 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
RFC1-212ENST00000510783 EFSO43281 561 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 DPYDQ12882 1025 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 PHACTR1Q9C0D0 580 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 MARK1Q9P0L2 795 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
RFC1-212ENST00000510783 LGR5O75473 907 aa10.12□□□□□ -0.79
RFC1-212ENST00000510783 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
RFC1-212ENST00000510783 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
RFC1-212ENST00000510783 SCG3Q8WXD2 468 aaKnown RBP10.12□□□□□ -0.79
RFC1-212ENST00000510783 HINFPQ9BQA5 517 aa10.12□□□□□ -0.79
RFC1-212ENST00000510783 RRAGCQ9HB90 399 aa10.12□□□□□ -0.79
RFC1-212ENST00000510783 KLF15Q9UIH9 416 aa10.12□□□□□ -0.79
RFC1-212ENST00000510783 GPC6Q9Y625 555 aaPredicted RBP10.12□□□□□ -0.79
RFC1-212ENST00000510783 USP17L15C9J2P7 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L10C9JJH3 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L13C9JLJ4 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L11C9JVI0 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L21D6R901 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L18D6R9N7 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L22D6RA61 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L17D6RBQ6 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L19D6RCP7 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L20D6RJB6 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 AMPD1P23109 780 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 USP17L24Q0WX57 530 aa10.11□□□□□ -0.79
RFC1-212ENST00000510783 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
RFC1-212ENST00000510783 FAM196BA6NMK8 535 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 EPXP11678 715 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 ADH6P28332 368 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 PCBP4P57723 403 aaKnown RBP10.1□□□□□ -0.79
RFC1-212ENST00000510783 LAMC2Q13753 1193 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 HSH2DQ96JZ2 352 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
RFC1-212ENST00000510783 GRIN2CQ14957 1233 aa10.09□□□□□ -0.79
RFC1-212ENST00000510783 FCHSD1Q86WN1 690 aa10.09□□□□□ -0.79
RFC1-212ENST00000510783 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
RFC1-212ENST00000510783 C2orf49Q9BVC5 232 aaPredicted RBP10.09□□□□□ -0.79
RFC1-212ENST00000510783 AVENQ9NQS1 362 aaPredicted RBP10.09□□□□□ -0.79
RFC1-212ENST00000510783 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
RFC1-212ENST00000510783 SFSWAPQ12872 951 aaKnown RBP10.08□□□□□ -0.8
RFC1-212ENST00000510783 ZNF468Q5VIY5 522 aaPredicted RBP10.08□□□□□ -0.8
RFC1-212ENST00000510783 ALDH16A1Q8IZ83 802 aa10.08□□□□□ -0.8
RFC1-212ENST00000510783 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
RFC1-212ENST00000510783 MKL2Q9ULH7 1088 aa10.08□□□□□ -0.8
RFC1-212ENST00000510783 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
RFC1-212ENST00000510783 EIF4G1Q04637 1599 aaKnown RBP10.08□□□□□ -0.8
RFC1-212ENST00000510783 HOXB4P17483 251 aaPredicted RBP10.07□□□□□ -0.8
RFC1-212ENST00000510783 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 STAG2Q8N3U4 1231 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 ZNF280CQ8ND82 737 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 NGLY1Q96IV0 654 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 DCAF5Q96JK2 942 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 SUSD3Q96L08 255 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
RFC1-212ENST00000510783 RFX1P22670 979 aa10.06□□□□□ -0.8
RFC1-212ENST00000510783 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
RFC1-212ENST00000510783 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
RFC1-212ENST00000510783 ARXQ96QS3 562 aa10.06□□□□□ -0.8
RFC1-212ENST00000510783 LINC00114Q6XXX2 140 aa10.05□□□□□ -0.8
RFC1-212ENST00000510783 CHSY3Q70JA7 882 aa10.05□□□□□ -0.8
RFC1-212ENST00000510783 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
RFC1-212ENST00000510783 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
RFC1-212ENST00000510783 BRD7Q9NPI1 651 aa10.04□□□□□ -0.8
RFC1-212ENST00000510783 IGFBP4P22692 258 aa10.03□□□□□ -0.8
RFC1-212ENST00000510783 DGKGP49619 791 aa10.02□□□□□ -0.81
RFC1-212ENST00000510783 TYRO3Q06418 890 aa10.02□□□□□ -0.81
RFC1-212ENST00000510783 PLA2G4EQ3MJ16 856 aa10.02□□□□□ -0.81
RFC1-212ENST00000510783 SUV39H2Q9H5I1 410 aa10.02□□□□□ -0.81
RFC1-212ENST00000510783 COL8A1P27658 744 aa10.01□□□□□ -0.81
RFC1-212ENST00000510783 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
RFC1-212ENST00000510783 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
RFC1-212ENST00000510783 BTLAQ7Z6A9 289 aa10□□□□□ -0.81
RFC1-212ENST00000510783 RAB44Q7Z6P3 723 aaPredicted RBP10□□□□□ -0.81
RFC1-212ENST00000510783 ZMYND15Q9H091 742 aa10□□□□□ -0.81
RFC1-212ENST00000510783 KCNH4Q9UQ05 1017 aa10□□□□□ -0.81
RFC1-212ENST00000510783 ELOA3CA0A087WX78 387 aaPredicted RBP9.99□□□□□ -0.81
RFC1-212ENST00000510783 ELOA3DA6NLF2 546 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms