RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CHSY3Q70JA7 882 aa14.43□□□□□ -0.1
USP53-206ENST00000510737 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
USP53-206ENST00000510737 MKRN1Q9UHC7 482 aaKnown RBP14.43□□□□□ -0.1
USP53-206ENST00000510737 ZNF232Q9UNY5 417 aa14.43□□□□□ -0.1
USP53-206ENST00000510737 ZNF468Q5VIY5 522 aaPredicted RBP14.42□□□□□ -0.1
USP53-206ENST00000510737 MARK1Q9P0L2 795 aa14.42□□□□□ -0.1
USP53-206ENST00000510737 SERTM1A2A2V5 107 aa14.41□□□□□ -0.1
USP53-206ENST00000510737 AVENQ9NQS1 362 aaPredicted RBP14.41□□□□□ -0.1
USP53-206ENST00000510737 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
USP53-206ENST00000510737 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
USP53-206ENST00000510737 SFI1A8K8P3 1242 aa14.39□□□□□ -0.11
USP53-206ENST00000510737 LARGE2Q8N3Y3 721 aa14.39□□□□□ -0.11
USP53-206ENST00000510737 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
USP53-206ENST00000510737 GNB5O14775 395 aa14.38□□□□□ -0.11
USP53-206ENST00000510737 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
USP53-206ENST00000510737 SIX5Q8N196 739 aa14.38□□□□□ -0.11
USP53-206ENST00000510737 GLMNQ92990 594 aa14.38□□□□□ -0.11
USP53-206ENST00000510737 ZNF594Q96JF6 807 aaPredicted RBP14.38□□□□□ -0.11
USP53-206ENST00000510737 MDFIQ99750 246 aa14.38□□□□□ -0.11
USP53-206ENST00000510737 C21orf2O43822 256 aa14.37□□□□□ -0.11
USP53-206ENST00000510737 SFSWAPQ12872 951 aaKnown RBP14.37□□□□□ -0.11
USP53-206ENST00000510737 PRR12Q9ULL5 1215 aa14.37□□□□□ -0.11
USP53-206ENST00000510737 HCN4Q9Y3Q4 1203 aa14.37□□□□□ -0.11
USP53-206ENST00000510737 PALM3A6NDB9 673 aaPredicted RBP14.36□□□□□ -0.11
USP53-206ENST00000510737 PSMA6P60900 246 aaKnown RBP14.36□□□□□ -0.11
USP53-206ENST00000510737 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
USP53-206ENST00000510737 SLC30A3Q99726 388 aa14.36□□□□□ -0.11
USP53-206ENST00000510737 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
USP53-206ENST00000510737 M0R2N6 131 aa14.35□□□□□ -0.11
USP53-206ENST00000510737 HIRAP54198 1017 aaPredicted RBP14.35□□□□□ -0.11
USP53-206ENST00000510737 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
USP53-206ENST00000510737 HSH2DQ96JZ2 352 aa14.35□□□□□ -0.11
USP53-206ENST00000510737 SYT9Q86SS6 491 aa14.34□□□□□ -0.11
USP53-206ENST00000510737 ALYREFQ86V81 257 aaKnown RBP14.34□□□□□ -0.11
USP53-206ENST00000510737 MAFBQ9Y5Q3 323 aaPredicted RBP14.34□□□□□ -0.11
USP53-206ENST00000510737 GPC6Q9Y625 555 aaPredicted RBP14.34□□□□□ -0.11
USP53-206ENST00000510737 ADAM23O75077 832 aa14.33□□□□□ -0.12
USP53-206ENST00000510737 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.12
USP53-206ENST00000510737 PHACTR1Q9C0D0 580 aa14.33□□□□□ -0.12
USP53-206ENST00000510737 TMEM132AQ24JP5 1023 aa14.32□□□□□ -0.12
USP53-206ENST00000510737 TRIM11Q96F44 468 aa14.32□□□□□ -0.12
USP53-206ENST00000510737 C1orf53Q5VUE5 145 aa14.31□□□□□ -0.12
USP53-206ENST00000510737 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
USP53-206ENST00000510737 ELOA3DA6NLF2 546 aaPredicted RBP14.29□□□□□ -0.12
USP53-206ENST00000510737 C1QTNF9BB2RNN3 333 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 BAG6P46379 1132 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 ELOA3BQ3SY89 546 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 CD163Q86VB7 1156 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 ELOA3Q8NG57 546 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 NEUROD4Q9HD90 331 aa14.29□□□□□ -0.12
USP53-206ENST00000510737 RASA1P20936 1047 aa14.28□□□□□ -0.12
USP53-206ENST00000510737 CHRNA4P43681 627 aa14.28□□□□□ -0.12
USP53-206ENST00000510737 RAB44Q7Z6P3 723 aaPredicted RBP14.28□□□□□ -0.12
USP53-206ENST00000510737 SUSD3Q96L08 255 aa14.28□□□□□ -0.12
USP53-206ENST00000510737 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.13
USP53-206ENST00000510737 SIN3BO75182 1162 aa14.26□□□□□ -0.13
USP53-206ENST00000510737 LGR5O75473 907 aa14.26□□□□□ -0.13
USP53-206ENST00000510737 TYRO3Q06418 890 aa14.26□□□□□ -0.13
USP53-206ENST00000510737 CRTC2Q53ET0 693 aaPredicted RBP14.26□□□□□ -0.13
USP53-206ENST00000510737 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
USP53-206ENST00000510737 BRD7Q9NPI1 651 aa14.26□□□□□ -0.13
USP53-206ENST00000510737 ATAD2Q6PL18 1390 aa14.25□□□□□ -0.13
USP53-206ENST00000510737 PIK3R2O00459 728 aa14.25□□□□□ -0.13
USP53-206ENST00000510737 SPEM2Q0P670 501 aa14.25□□□□□ -0.13
USP53-206ENST00000510737 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
USP53-206ENST00000510737 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
USP53-206ENST00000510737 C2orf49Q9BVC5 232 aaPredicted RBP14.25□□□□□ -0.13
USP53-206ENST00000510737 STARD13Q9Y3M8 1113 aa14.25□□□□□ -0.13
USP53-206ENST00000510737 ADARB2-AS1A8MUL3 147 aa14.24□□□□□ -0.13
USP53-206ENST00000510737 COL9A3Q14050 684 aaPredicted RBP14.24□□□□□ -0.13
USP53-206ENST00000510737 ALDH16A1Q8IZ83 802 aa14.24□□□□□ -0.13
USP53-206ENST00000510737 SCG3Q8WXD2 468 aaKnown RBP14.24□□□□□ -0.13
USP53-206ENST00000510737 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
USP53-206ENST00000510737 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
USP53-206ENST00000510737 NOP53Q9NZM5 478 aaKnown RBP14.23□□□□□ -0.13
USP53-206ENST00000510737 SEC13P55735 322 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 KCNQ4P56696 695 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 PTK7Q13308 1070 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 STAG2Q8N3U4 1231 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 TNFRSF25Q93038 417 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 CHMP3Q9Y3E7 222 aa14.22□□□□□ -0.13
USP53-206ENST00000510737 FURINP09958 794 aa14.21□□□□□ -0.13
USP53-206ENST00000510737 C8orf86Q6ZUL3 223 aa14.21□□□□□ -0.13
USP53-206ENST00000510737 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
USP53-206ENST00000510737 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
USP53-206ENST00000510737 A6NJR5 290 aa14.19□□□□□ -0.14
USP53-206ENST00000510737 DPYDQ12882 1025 aa14.19□□□□□ -0.14
USP53-206ENST00000510737 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
USP53-206ENST00000510737 CALR3Q96L12 384 aaKnown RBP14.19□□□□□ -0.14
USP53-206ENST00000510737 KCNH4Q9UQ05 1017 aa14.19□□□□□ -0.14
USP53-206ENST00000510737 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
USP53-206ENST00000510737 ALBP02768 609 aa14.18□□□□□ -0.14
USP53-206ENST00000510737 ALAS2P22557 587 aa14.18□□□□□ -0.14
USP53-206ENST00000510737 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
USP53-206ENST00000510737 M0R082 166 aa14.17□□□□□ -0.14
USP53-206ENST00000510737 BTLAQ7Z6A9 289 aa14.17□□□□□ -0.14
USP53-206ENST00000510737 ZNF417Q8TAU3 575 aa14.17□□□□□ -0.14
USP53-206ENST00000510737 ZNF587Q96SQ5 575 aaPredicted RBP14.17□□□□□ -0.14
USP53-206ENST00000510737 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
USP53-206ENST00000510737 ADH7P40394 386 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms