RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 DPEP1P16444 411 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 GPR162Q16538 588 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 ZNF652Q9Y2D9 606 aa15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 GOLGB1Q14789 3259 aaKnown RBP15.26■□□□□ 0.03
HMGXB3-203ENST00000510472 CARMIL3Q8ND23 1372 aa15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 COPS6Q7L5N1 327 aa15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 TSPYL6Q8N831 410 aa15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 TSR2Q969E8 191 aaKnown RBP15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
HMGXB3-203ENST00000510472 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 ELL2O00472 640 aaPredicted RBP15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
HMGXB3-203ENST00000510472 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 KIF13BQ9NQT8 1826 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 KIF6Q6ZMV9 814 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 MIER1Q8N108 512 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
HMGXB3-203ENST00000510472 CHRNA5P30532 468 aa15.22■□□□□ 0.03
HMGXB3-203ENST00000510472 ATP10DQ9P241 1426 aa15.22■□□□□ 0.03
HMGXB3-203ENST00000510472 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 KLRG2A4D1S0 409 aaPredicted RBP15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 TPTE2Q6XPS3 522 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 CCDC24Q8N4L8 307 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 CNBD1Q8NA66 436 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 HYPKQ9NX55 129 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 PIM2Q9P1W9 311 aa15.21■□□□□ 0.03
HMGXB3-203ENST00000510472 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 UBN2Q6ZU65 1347 aa15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 AIMP1Q12904 312 aaKnown RBP15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 NBPF5PQ86XG9 351 aaPredicted RBP15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
HMGXB3-203ENST00000510472 BCORQ6W2J9 1755 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 VAMP4O75379 141 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 PDE6BP35913 854 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 TCIRG1Q13488 830 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
HMGXB3-203ENST00000510472 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
HMGXB3-203ENST00000510472 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
HMGXB3-203ENST00000510472 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
HMGXB3-203ENST00000510472 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
HMGXB3-203ENST00000510472 BCS1LQ9Y276 419 aa15.18■□□□□ 0.02
HMGXB3-203ENST00000510472 IBTKQ9P2D0 1353 aaPredicted RBP15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 H0YIN7 160 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 SRGNP10124 158 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 GPTP24298 496 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 ST5P78524 1137 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 PARP10Q53GL7 1025 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 AFDNP55196 1824 aaKnown RBP15.17■□□□□ 0.02
HMGXB3-203ENST00000510472 NTSR2O95665 410 aa15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 EXOSC9Q06265 439 aaKnown RBP15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 ISCA1Q9BUE6 129 aa15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
HMGXB3-203ENST00000510472 FAM177BA6PVY3 158 aa15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 NUTM1Q86Y26 1132 aa15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 TTLL6Q8N841 843 aa15.15■□□□□ 0.02
HMGXB3-203ENST00000510472 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
HMGXB3-203ENST00000510472 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
HMGXB3-203ENST00000510472 STYK1Q6J9G0 422 aa15.14■□□□□ 0.01
HMGXB3-203ENST00000510472 TRMT2AQ8IZ69 625 aaKnown RBP15.14■□□□□ 0.01
HMGXB3-203ENST00000510472 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 TCERG1O14776 1098 aaKnown RBP15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 NPHP1O15259 732 aa15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 PPP1R42Q7Z4L9 355 aa15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 MASTLQ96GX5 879 aa15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 N4BP2Q86UW6 1770 aaPredicted RBP15.13■□□□□ 0.01
HMGXB3-203ENST00000510472 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 E9PSI1 815 aa15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 G2E3Q7L622 706 aa15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.01
HMGXB3-203ENST00000510472 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms