RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 DPY19L2Q6NUT2 758 aa26.53■■□□□ 1.84
TRIO-215ENST00000510281 ZNF622Q969S3 477 aaKnown RBP eCLIP26.53■■□□□ 1.84
TRIO-215ENST00000510281 LTBP3Q9NS15 1303 aa26.52■■□□□ 1.84
TRIO-215ENST00000510281 PRAMEF22A3QJZ6 481 aa26.51■■□□□ 1.83
TRIO-215ENST00000510281 C21orf2O43822 256 aa26.51■■□□□ 1.83
TRIO-215ENST00000510281 CCDC146Q8IYE0 955 aa26.51■■□□□ 1.83
TRIO-215ENST00000510281 PNNQ9H307 717 aaKnown RBP26.51■■□□□ 1.83
TRIO-215ENST00000510281 TBC1D2BQ9UPU7 963 aa26.51■■□□□ 1.83
TRIO-215ENST00000510281 ERFEQ4G0M1 354 aa26.5■■□□□ 1.83
TRIO-215ENST00000510281 MIS18AQ9NYP9 233 aa26.5■■□□□ 1.83
TRIO-215ENST00000510281 COL11A2P13942 1736 aaPredicted RBP26.5■■□□□ 1.83
TRIO-215ENST00000510281 CAMTA2O94983 1202 aa26.49■■□□□ 1.83
TRIO-215ENST00000510281 TNS4Q8IZW8 715 aa26.48■■□□□ 1.83
TRIO-215ENST00000510281 TAOK3Q9H2K8 898 aa26.48■■□□□ 1.83
TRIO-215ENST00000510281 FER1L6Q2WGJ9 1857 aa26.48■■□□□ 1.83
TRIO-215ENST00000510281 CCDC88AQ3V6T2 1871 aa26.48■■□□□ 1.83
TRIO-215ENST00000510281 HSPA1AP0DMV8 641 aaKnown RBP26.47■■□□□ 1.83
TRIO-215ENST00000510281 HSPA1BP0DMV9 641 aaKnown RBP26.47■■□□□ 1.83
TRIO-215ENST00000510281 WDR43Q15061 677 aaKnown RBP eCLIP26.47■■□□□ 1.83
TRIO-215ENST00000510281 STYK1Q6J9G0 422 aa26.47■■□□□ 1.83
TRIO-215ENST00000510281 CCDC24Q8N4L8 307 aa26.47■■□□□ 1.83
TRIO-215ENST00000510281 CNKSR1Q969H4 720 aa26.47■■□□□ 1.83
TRIO-215ENST00000510281 SETDB2Q96T68 719 aa26.47■■□□□ 1.83
TRIO-215ENST00000510281 A1BGP04217 495 aa26.46■■□□□ 1.83
TRIO-215ENST00000510281 TAF7Q15545 349 aaPredicted RBP26.46■■□□□ 1.83
TRIO-215ENST00000510281 CNBD1Q8NA66 436 aa26.46■■□□□ 1.83
TRIO-215ENST00000510281 ZNF330Q9Y3S2 320 aaPredicted RBP26.46■■□□□ 1.83
TRIO-215ENST00000510281 SRGNP10124 158 aa26.45■■□□□ 1.82
TRIO-215ENST00000510281 ZNF219Q9P2Y4 722 aaPredicted RBP26.45■■□□□ 1.82
TRIO-215ENST00000510281 RRP7AQ9Y3A4 280 aaKnown RBP26.45■■□□□ 1.82
TRIO-215ENST00000510281 USP16Q9Y5T5 823 aa26.45■■□□□ 1.82
TRIO-215ENST00000510281 DICER1Q9UPY3 1922 aaKnown RBP26.45■■□□□ 1.82
TRIO-215ENST00000510281 KDM3BQ7LBC6 1761 aa26.44■■□□□ 1.82
TRIO-215ENST00000510281 PIP4K2AP48426 406 aaPredicted RBP26.44■■□□□ 1.82
TRIO-215ENST00000510281 RIPK4P57078 832 aa26.44■■□□□ 1.82
TRIO-215ENST00000510281 SOGA3Q5TF21 947 aa26.44■■□□□ 1.82
TRIO-215ENST00000510281 ADAMTS8Q9UP79 889 aa26.44■■□□□ 1.82
TRIO-215ENST00000510281 TMPOP42166 694 aaKnown RBP26.43■■□□□ 1.82
TRIO-215ENST00000510281 ST5P78524 1137 aa26.43■■□□□ 1.82
TRIO-215ENST00000510281 PRPF40BQ6NWY9 871 aaKnown RBP26.43■■□□□ 1.82
TRIO-215ENST00000510281 NPM2Q86SE8 214 aaKnown RBP26.43■■□□□ 1.82
TRIO-215ENST00000510281 MASTLQ96GX5 879 aa26.43■■□□□ 1.82
TRIO-215ENST00000510281 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
TRIO-215ENST00000510281 CHADLQ6NUI6 762 aa26.42■■□□□ 1.82
TRIO-215ENST00000510281 CREBZFQ9NS37 354 aa26.42■■□□□ 1.82
TRIO-215ENST00000510281 DZIP3Q86Y13 1208 aaKnown RBP26.41■■□□□ 1.82
TRIO-215ENST00000510281 BCORQ6W2J9 1755 aa26.41■■□□□ 1.82
TRIO-215ENST00000510281 NEUROD2Q15784 382 aa26.4■■□□□ 1.82
TRIO-215ENST00000510281 CLEC4GQ6UXB4 293 aa26.4■■□□□ 1.82
TRIO-215ENST00000510281 PNISRQ8TF01 805 aaKnown RBP26.4■■□□□ 1.82
TRIO-215ENST00000510281 SLX4Q8IY92 1834 aa26.39■■□□□ 1.82
TRIO-215ENST00000510281 DDNO94850 711 aaPredicted RBP26.39■■□□□ 1.82
TRIO-215ENST00000510281 MIER1Q8N108 512 aa26.39■■□□□ 1.82
TRIO-215ENST00000510281 C7orf43Q8WVR3 580 aa26.39■■□□□ 1.82
TRIO-215ENST00000510281 RUNDC1Q96C34 613 aa26.39■■□□□ 1.82
TRIO-215ENST00000510281 ARFGEF2Q9Y6D5 1785 aa26.38■■□□□ 1.81
TRIO-215ENST00000510281 NPHP1O15259 732 aa26.38■■□□□ 1.81
TRIO-215ENST00000510281 CAPN15O75808 1086 aa26.38■■□□□ 1.81
TRIO-215ENST00000510281 CCDC184Q52MB2 194 aa26.38■■□□□ 1.81
TRIO-215ENST00000510281 RGL2O15211 777 aa26.37■■□□□ 1.81
TRIO-215ENST00000510281 POTEIP0CG38 1075 aa26.37■■□□□ 1.81
TRIO-215ENST00000510281 POTEJP0CG39 1038 aa26.37■■□□□ 1.81
TRIO-215ENST00000510281 L3MBTL3Q96JM7 780 aaPredicted RBP26.37■■□□□ 1.81
TRIO-215ENST00000510281 LAMB4A4D0S4 1761 aa26.37■■□□□ 1.81
TRIO-215ENST00000510281 KLRG2A4D1S0 409 aaPredicted RBP26.36■■□□□ 1.81
TRIO-215ENST00000510281 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
TRIO-215ENST00000510281 IQCA1LA6NCM1 817 aa26.35■■□□□ 1.81
TRIO-215ENST00000510281 LMOD3Q0VAK6 560 aa26.35■■□□□ 1.81
TRIO-215ENST00000510281 NBPF5PQ86XG9 351 aaPredicted RBP26.35■■□□□ 1.81
TRIO-215ENST00000510281 NBPF26B4DH59 902 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 CCDC93Q567U6 631 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 NBPF10Q6P3W6 841 aaKnown RBP26.34■■□□□ 1.81
TRIO-215ENST00000510281 NBPF15Q8N660 670 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 TSPYL4Q9UJ04 414 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 ZNF652Q9Y2D9 606 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 PASKQ96RG2 1323 aa26.34■■□□□ 1.81
TRIO-215ENST00000510281 NPR1P16066 1061 aa26.33■■□□□ 1.81
TRIO-215ENST00000510281 LDHDQ86WU2 507 aa26.33■■□□□ 1.81
TRIO-215ENST00000510281 TRIM35Q9UPQ4 493 aa26.33■■□□□ 1.81
TRIO-215ENST00000510281 TAF1DQ9H5J8 278 aaPredicted RBP26.32■■□□□ 1.8
TRIO-215ENST00000510281 MKRN1Q9UHC7 482 aaKnown RBP26.32■■□□□ 1.8
TRIO-215ENST00000510281 CNTNAP1P78357 1384 aa26.31■■□□□ 1.8
TRIO-215ENST00000510281 FKBP4Q02790 459 aaKnown RBP eCLIP26.3■■□□□ 1.8
TRIO-215ENST00000510281 TPTE2Q6XPS3 522 aa26.29■■□□□ 1.8
TRIO-215ENST00000510281 SCN4AP35499 1836 aa26.28■■□□□ 1.8
TRIO-215ENST00000510281 CACNA1SQ13698 1873 aa26.28■■□□□ 1.8
TRIO-215ENST00000510281 NIP7Q9Y221 180 aaKnown RBP eCLIP26.27■■□□□ 1.8
TRIO-215ENST00000510281 ZNF541Q9H0D2 1346 aa26.26■■□□□ 1.79
TRIO-215ENST00000510281 APAF1O14727 1248 aa26.26■■□□□ 1.79
TRIO-215ENST00000510281 ANP32CO43423 234 aa26.26■■□□□ 1.79
TRIO-215ENST00000510281 RTKN2Q8IZC4 609 aa26.26■■□□□ 1.79
TRIO-215ENST00000510281 ZNF277Q9NRM2 450 aaPredicted RBP26.26■■□□□ 1.79
TRIO-215ENST00000510281 ITGBL1O95965 494 aaPredicted RBP26.25■■□□□ 1.79
TRIO-215ENST00000510281 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
TRIO-215ENST00000510281 BABAM1Q9NWV8 329 aa26.24■■□□□ 1.79
TRIO-215ENST00000510281 LAS1LQ9Y4W2 734 aaKnown RBP26.24■■□□□ 1.79
TRIO-215ENST00000510281 SNED1Q8TER0 1413 aa26.23■■□□□ 1.79
TRIO-215ENST00000510281 KRT24Q2M2I5 525 aa26.23■■□□□ 1.79
TRIO-215ENST00000510281 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
TRIO-215ENST00000510281 HACL1Q9UJ83 578 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms