RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 F6X3S4 739 aa9.25□□□□□ -0.93
CAST-228ENST00000509903 GSPT1P15170 499 aaKnown RBP9.25□□□□□ -0.93
CAST-228ENST00000509903 CCDC30Q5VVM6 783 aa9.25□□□□□ -0.93
CAST-228ENST00000509903 G2E3Q7L622 706 aa9.25□□□□□ -0.93
CAST-228ENST00000509903 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
CAST-228ENST00000509903 PBXIP1Q96AQ6 731 aa9.25□□□□□ -0.93
CAST-228ENST00000509903 HSP90AA1P07900 732 aaKnown RBP9.24□□□□□ -0.93
CAST-228ENST00000509903 TSR1Q2NL82 804 aaKnown RBP9.24□□□□□ -0.93
CAST-228ENST00000509903 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
CAST-228ENST00000509903 FKBP5Q13451 457 aaPredicted RBP9.24□□□□□ -0.93
CAST-228ENST00000509903 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
CAST-228ENST00000509903 C16orf71Q8IYS4 520 aaPredicted RBP9.24□□□□□ -0.93
CAST-228ENST00000509903 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
CAST-228ENST00000509903 MARF1Q9Y4F3 1742 aaKnown RBP9.24□□□□□ -0.93
CAST-228ENST00000509903 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
CAST-228ENST00000509903 LRRC37A3O60309 1634 aa9.24□□□□□ -0.93
CAST-228ENST00000509903 SMARCA5O60264 1052 aaPredicted RBP9.23□□□□□ -0.93
CAST-228ENST00000509903 GNAI2P04899 355 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 MCM4P33991 863 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 KCNA1Q09470 495 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 SOS1Q07889 1333 aaPredicted RBP9.23□□□□□ -0.93
CAST-228ENST00000509903 TAF7Q15545 349 aaPredicted RBP9.23□□□□□ -0.93
CAST-228ENST00000509903 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 OTUD7AQ8TE49 926 aaPredicted RBP9.23□□□□□ -0.93
CAST-228ENST00000509903 KIF2CQ99661 725 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
CAST-228ENST00000509903 GNAI3P08754 354 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 PSME1Q06323 249 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 QPCTQ16769 361 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 IL17REQ8NFR9 667 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 BABAM1Q9NWV8 329 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 FAM208AQ9UK61 1670 aaKnown RBP9.22□□□□□ -0.93
CAST-228ENST00000509903 K7ELQ4 463 aaPredicted RBP9.22□□□□□ -0.93
CAST-228ENST00000509903 ESCO1Q5FWF5 840 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 METTL3Q86U44 580 aaKnown RBP9.22□□□□□ -0.93
CAST-228ENST00000509903 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
CAST-228ENST00000509903 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
CAST-228ENST00000509903 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.93
CAST-228ENST00000509903 LTN1O94822 1766 aa9.21□□□□□ -0.93
CAST-228ENST00000509903 CACNA1FO60840 1977 aa9.21□□□□□ -0.93
CAST-228ENST00000509903 DDX11L8A8MPP1 907 aa9.21□□□□□ -0.94
CAST-228ENST00000509903 EVI5O60447 810 aa9.21□□□□□ -0.94
CAST-228ENST00000509903 SDSP20132 328 aa9.21□□□□□ -0.94
CAST-228ENST00000509903 TMEM92Q6UXU6 159 aa9.21□□□□□ -0.94
CAST-228ENST00000509903 IP6K1Q92551 441 aa9.21□□□□□ -0.94
CAST-228ENST00000509903 ADGRL3Q9HAR2 1447 aa9.2□□□□□ -0.94
CAST-228ENST00000509903 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
CAST-228ENST00000509903 RABEP1Q15276 862 aa9.2□□□□□ -0.94
CAST-228ENST00000509903 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAST-228ENST00000509903 KCNH5Q8NCM2 988 aa9.2□□□□□ -0.94
CAST-228ENST00000509903 EXOC6BQ9Y2D4 811 aa9.2□□□□□ -0.94
CAST-228ENST00000509903 SETD1BQ9UPS6 1966 aaKnown RBP9.19□□□□□ -0.94
CAST-228ENST00000509903 REC8O95072 547 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
CAST-228ENST00000509903 DDIT3P35638 169 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 L1TD1Q5T7N2 865 aaKnown RBP9.19□□□□□ -0.94
CAST-228ENST00000509903 GBP4Q96PP9 640 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 NFAT5O94916 1531 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 ZNF142P52746 1687 aaPredicted RBP9.19□□□□□ -0.94
CAST-228ENST00000509903 PDE1AP54750 535 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 NBPF6Q5VWK0 638 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 PPP2R2DQ66LE6 453 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 NBPF4Q96M43 638 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 LRRCC1Q9C099 1032 aa9.19□□□□□ -0.94
CAST-228ENST00000509903 PXDNLA1KZ92 1463 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 KDM4FA0A1W2PPD8 638 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 TTLL13PA6NNM8 815 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 GPR37L1O60883 481 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
CAST-228ENST00000509903 PDCD7Q8N8D1 485 aaKnown RBP9.18□□□□□ -0.94
CAST-228ENST00000509903 TNPO1Q92973 898 aaKnown RBP9.18□□□□□ -0.94
CAST-228ENST00000509903 CHMP4AQ9BY43 222 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 OSBPL3Q9H4L5 887 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
CAST-228ENST00000509903 CEMIPQ8WUJ3 1361 aa9.18□□□□□ -0.94
CAST-228ENST00000509903 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 ERC2O15083 957 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
CAST-228ENST00000509903 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
CAST-228ENST00000509903 ATP8B2P98198 1209 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 TEFQ10587 303 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 RAB3GAP1Q15042 981 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 IGSF5Q9NSI5 407 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 PNMA6EA0A0J9YXQ4 647 aa9.17□□□□□ -0.94
CAST-228ENST00000509903 ZNF530Q6P9A1 599 aaPredicted RBP9.17□□□□□ -0.94
CAST-228ENST00000509903 KIAA1522Q9P206 1035 aaPredicted RBP9.17□□□□□ -0.94
CAST-228ENST00000509903 GOLGA6L3A6NEY3 463 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 MAP3K7O43318 606 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 ST18O60284 1047 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 HOXB7P09629 217 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
CAST-228ENST00000509903 MX1P20591 662 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 PLEKHO1Q53GL0 409 aaPredicted RBP9.16□□□□□ -0.94
CAST-228ENST00000509903 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
CAST-228ENST00000509903 PHAXQ9H814 394 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms