RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 ERVV-2B6SEH9 535 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 H0YIN7 160 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 HMGB2P26583 209 aaKnown RBP6.86□□□□□ -1.31
HTT-206ENST00000509618 EPS15P42566 896 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 SLC39A6Q13433 755 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 CARD11Q9BXL7 1154 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.86□□□□□ -1.313e-8■■□□□ 12.3
HTT-206ENST00000509618 NARFQ9UHQ1 456 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 TLL2Q9Y6L7 1015 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 SCN11AQ9UI33 1791 aa6.86□□□□□ -1.31
HTT-206ENST00000509618 KIF24Q5T7B8 1368 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 ZPR1O75312 459 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 SCNN1DP51172 638 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 CABP4P57796 275 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 HABP4Q5JVS0 413 aaKnown RBP6.85□□□□□ -1.31
HTT-206ENST00000509618 ZNF530Q6P9A1 599 aaPredicted RBP6.85□□□□□ -1.31
HTT-206ENST00000509618 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 BCORQ6W2J9 1755 aa6.85□□□□□ -1.31
HTT-206ENST00000509618 WASHC2AQ641Q2 1341 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 SRGNP10124 158 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 HOXD11P31277 338 aaPredicted RBP6.84□□□□□ -1.31
HTT-206ENST00000509618 SAPCD2Q86UD0 394 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 FOXD4L1Q9NU39 408 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 POLKQ9UBT6 870 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 ARFGEF2Q9Y6D5 1785 aa6.84□□□□□ -1.31
HTT-206ENST00000509618 SHTN1A0MZ66 631 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 FZD9O00144 591 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 CANXP27824 592 aaKnown RBP6.83□□□□□ -1.32
HTT-206ENST00000509618 FXR1P51114 621 aaKnown RBP eCLIP6.83□□□□□ -1.32
HTT-206ENST00000509618 CCER1Q8TC90 406 aaPredicted RBP6.83□□□□□ -1.32
HTT-206ENST00000509618 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 BRIP1Q9BX63 1249 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 GLIS2Q9BZE0 524 aaPredicted RBP6.83□□□□□ -1.32
HTT-206ENST00000509618 LGR6Q9HBX8 967 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 MRC1P22897 1456 aa6.83□□□□□ -1.32
HTT-206ENST00000509618 MKI67P46013 3256 aaKnown RBP6.83□□□□□ -1.32
HTT-206ENST00000509618 SZT2Q5T011 3432 aa6.82□□□□□ -1.32
HTT-206ENST00000509618 ZBTB22O15209 634 aa6.82□□□□□ -1.32
HTT-206ENST00000509618 ECE1P42892 770 aa6.82□□□□□ -1.32
HTT-206ENST00000509618 BRPF1P55201 1214 aaPredicted RBP6.82□□□□□ -1.32
HTT-206ENST00000509618 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
HTT-206ENST00000509618 PUS7Q96PZ0 661 aaKnown RBP6.82□□□□□ -1.32
HTT-206ENST00000509618 GJA3Q9Y6H8 435 aa6.82□□□□□ -1.32
HTT-206ENST00000509618 TRIOBPQ9H2D6 2365 aa6.82□□□□□ -1.32
HTT-206ENST00000509618 HTTP42858 3142 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 FAM155AB1AL88 458 aaPredicted RBP6.81□□□□□ -1.32
HTT-206ENST00000509618 CELF2O95319 508 aaKnown RBP6.81□□□□□ -1.32
HTT-206ENST00000509618 MAP2K2P36507 400 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
HTT-206ENST00000509618 PIP4K2AP48426 406 aaPredicted RBP6.81□□□□□ -1.32
HTT-206ENST00000509618 MTHFSP49914 203 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 EIF5P55010 431 aaKnown RBP6.81□□□□□ -1.32
HTT-206ENST00000509618 STYK1Q6J9G0 422 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 TBC1D2BQ9UPU7 963 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 HPS5Q9UPZ3 1129 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 TRPM7Q96QT4 1865 aa6.81□□□□□ -1.32
HTT-206ENST00000509618 CLSPNQ9HAW4 1339 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 CAMTA2O94983 1202 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 PDE6BP35913 854 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 IARSP41252 1262 aaKnown RBP6.8□□□□□ -1.32
HTT-206ENST00000509618 HIRAP54198 1017 aaPredicted RBP6.8□□□□□ -1.32
HTT-206ENST00000509618 CCDC93Q567U6 631 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 PNMA8AQ86V59 439 aaPredicted RBP6.8□□□□□ -1.32
HTT-206ENST00000509618 SYNE4Q8N205 404 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 TRPM4Q8TD43 1214 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 ZNF408Q9H9D4 720 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 ABCC12Q96J65 1359 aa6.8□□□□□ -1.32
HTT-206ENST00000509618 GPC2Q8N158 579 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 CNBD1Q8NA66 436 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 CNKSR1Q969H4 720 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 MASTLQ96GX5 879 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 SLC52A2Q9HAB3 445 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 ZNF330Q9Y3S2 320 aaPredicted RBP6.79□□□□□ -1.32
HTT-206ENST00000509618 UBR2Q8IWV8 1755 aa6.79□□□□□ -1.32
HTT-206ENST00000509618 CA12O43570 354 aa6.78□□□□□ -1.32
HTT-206ENST00000509618 PLEKHO1Q53GL0 409 aaPredicted RBP6.78□□□□□ -1.32
HTT-206ENST00000509618 RNF186Q9NXI6 227 aa6.78□□□□□ -1.32
HTT-206ENST00000509618 TIMELESSQ9UNS1 1208 aa6.78□□□□□ -1.32
HTT-206ENST00000509618 CEP290O15078 2479 aa6.78□□□□□ -1.32
HTT-206ENST00000509618 PRAMEF22A3QJZ6 481 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 TRPA1O75762 1119 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 EGFRP00533 1210 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 A1BGP04217 495 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 HSP90AB1P08238 724 aaKnown RBP6.77□□□□□ -1.33
HTT-206ENST00000509618 KIF23Q02241 960 aaPredicted RBP6.77□□□□□ -1.33
HTT-206ENST00000509618 A0A0C4DFX4 3053 aa6.77□□□□□ -1.33
HTT-206ENST00000509618 KLRG2A4D1S0 409 aaPredicted RBP6.76□□□□□ -1.33
HTT-206ENST00000509618 FAM177BA6PVY3 158 aa6.76□□□□□ -1.33
HTT-206ENST00000509618 RNMTO43148 476 aaKnown RBP6.76□□□□□ -1.33
HTT-206ENST00000509618 KCNQ3O43525 872 aa6.76□□□□□ -1.33
HTT-206ENST00000509618 C3orf67Q6ZVT6 689 aa6.76□□□□□ -1.33
HTT-206ENST00000509618 CTU1Q7Z7A3 348 aaKnown RBP6.76□□□□□ -1.33
HTT-206ENST00000509618 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
HTT-206ENST00000509618 GPRC5DQ9NZD1 345 aa6.76□□□□□ -1.33
HTT-206ENST00000509618 RANBP2P49792 3224 aaKnown RBP6.76□□□□□ -1.33
HTT-206ENST00000509618 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 DLL1O00548 723 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 SLC24A1O60721 1099 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms