RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
HMGCR-208ENST00000509431 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
HMGCR-208ENST00000509431 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
HMGCR-208ENST00000509431 AOC2O75106 756 aa18.91■□□□□ 0.62
HMGCR-208ENST00000509431 SOX10P56693 466 aa18.91■□□□□ 0.62
HMGCR-208ENST00000509431 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
HMGCR-208ENST00000509431 MASTLQ96GX5 879 aa18.91■□□□□ 0.62
HMGCR-208ENST00000509431 ZBTB1Q9Y2K1 713 aa18.91■□□□□ 0.62
HMGCR-208ENST00000509431 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGCR-208ENST00000509431 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
HMGCR-208ENST00000509431 PRR5LQ6MZQ0 368 aa18.9■□□□□ 0.62
HMGCR-208ENST00000509431 GPC2Q8N158 579 aa18.9■□□□□ 0.62
HMGCR-208ENST00000509431 HHIPL1Q96JK4 782 aa18.9■□□□□ 0.62
HMGCR-208ENST00000509431 A0A087WZG4 1122 aa18.89■□□□□ 0.61
HMGCR-208ENST00000509431 FZD9O00144 591 aa18.89■□□□□ 0.61
HMGCR-208ENST00000509431 SRGNP10124 158 aa18.89■□□□□ 0.61
HMGCR-208ENST00000509431 CST9Q5W186 159 aa18.89■□□□□ 0.61
HMGCR-208ENST00000509431 SCN11AQ9UI33 1791 aa18.88■□□□□ 0.61
HMGCR-208ENST00000509431 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
HMGCR-208ENST00000509431 TBC1D9BQ66K14 1250 aa18.87■□□□□ 0.61
HMGCR-208ENST00000509431 C7orf43Q8WVR3 580 aa18.87■□□□□ 0.61
HMGCR-208ENST00000509431 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
HMGCR-208ENST00000509431 ST5P78524 1137 aa18.86■□□□□ 0.61
HMGCR-208ENST00000509431 RTKN2Q8IZC4 609 aa18.86■□□□□ 0.61
HMGCR-208ENST00000509431 ZNF277Q9NRM2 450 aaPredicted RBP18.86■□□□□ 0.61
HMGCR-208ENST00000509431 NPHP1O15259 732 aa18.85■□□□□ 0.61
HMGCR-208ENST00000509431 SAPCD2Q86UD0 394 aa18.85■□□□□ 0.61
HMGCR-208ENST00000509431 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
HMGCR-208ENST00000509431 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
HMGCR-208ENST00000509431 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
HMGCR-208ENST00000509431 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
HMGCR-208ENST00000509431 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
HMGCR-208ENST00000509431 NBPF15Q8N660 670 aa18.84■□□□□ 0.61
HMGCR-208ENST00000509431 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
HMGCR-208ENST00000509431 CIAPIN1Q6FI81 312 aa18.83■□□□□ 0.6
HMGCR-208ENST00000509431 USP50Q70EL3 339 aaPredicted RBP18.83■□□□□ 0.6
HMGCR-208ENST00000509431 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.6
HMGCR-208ENST00000509431 CANXP27824 592 aaKnown RBP18.82■□□□□ 0.6
HMGCR-208ENST00000509431 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
HMGCR-208ENST00000509431 JDP2Q8WYK2 163 aa18.82■□□□□ 0.6
HMGCR-208ENST00000509431 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
HMGCR-208ENST00000509431 TRAF5O00463 557 aa18.81■□□□□ 0.6
HMGCR-208ENST00000509431 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
HMGCR-208ENST00000509431 NOGQ13253 232 aa18.81■□□□□ 0.6
HMGCR-208ENST00000509431 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
HMGCR-208ENST00000509431 CARD14Q9BXL6 1004 aa18.81■□□□□ 0.6
HMGCR-208ENST00000509431 STARD3NLO95772 234 aa18.8■□□□□ 0.6
HMGCR-208ENST00000509431 NPR1P16066 1061 aa18.8■□□□□ 0.6
HMGCR-208ENST00000509431 BCORQ6W2J9 1755 aa18.8■□□□□ 0.6
HMGCR-208ENST00000509431 SAGE1Q9NXZ1 904 aa18.79■□□□□ 0.6
HMGCR-208ENST00000509431 MRC1P22897 1456 aa18.78■□□□□ 0.6
HMGCR-208ENST00000509431 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
HMGCR-208ENST00000509431 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
HMGCR-208ENST00000509431 GJA3Q9Y6H8 435 aa18.78■□□□□ 0.6
HMGCR-208ENST00000509431 EPS15P42566 896 aa18.77■□□□□ 0.6
HMGCR-208ENST00000509431 SCNN1DP51172 638 aa18.77■□□□□ 0.6
HMGCR-208ENST00000509431 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
HMGCR-208ENST00000509431 HABP4Q5JVS0 413 aaKnown RBP18.77■□□□□ 0.6
HMGCR-208ENST00000509431 PSMD1Q99460 953 aa18.77■□□□□ 0.6
HMGCR-208ENST00000509431 AKAP4Q5JQC9 854 aa18.76■□□□□ 0.59
HMGCR-208ENST00000509431 UBR2Q8IWV8 1755 aa18.74■□□□□ 0.59
HMGCR-208ENST00000509431 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
HMGCR-208ENST00000509431 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
HMGCR-208ENST00000509431 TBC1D2BQ9UPU7 963 aa18.74■□□□□ 0.59
HMGCR-208ENST00000509431 KLRG2A4D1S0 409 aaPredicted RBP18.73■□□□□ 0.59
HMGCR-208ENST00000509431 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
HMGCR-208ENST00000509431 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
HMGCR-208ENST00000509431 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
HMGCR-208ENST00000509431 TEX13AQ9BXU3 409 aaPredicted RBP18.72■□□□□ 0.59
HMGCR-208ENST00000509431 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
HMGCR-208ENST00000509431 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
HMGCR-208ENST00000509431 CC2D2BQ6DHV5 1058 aa18.71■□□□□ 0.59
HMGCR-208ENST00000509431 OLFM4Q6UX06 510 aa18.71■□□□□ 0.59
HMGCR-208ENST00000509431 NBPF5PQ86XG9 351 aaPredicted RBP18.71■□□□□ 0.59
HMGCR-208ENST00000509431 AEBP1Q8IUX7 1158 aa18.71■□□□□ 0.59
HMGCR-208ENST00000509431 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
HMGCR-208ENST00000509431 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
HMGCR-208ENST00000509431 PKN2Q16513 984 aaKnown RBP18.7■□□□□ 0.58
HMGCR-208ENST00000509431 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
HMGCR-208ENST00000509431 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
HMGCR-208ENST00000509431 SNED1Q8TER0 1413 aa18.69■□□□□ 0.58
HMGCR-208ENST00000509431 ZIC5Q96T25 663 aa18.69■□□□□ 0.58
HMGCR-208ENST00000509431 PGAP2Q9UHJ9 254 aa18.69■□□□□ 0.58
HMGCR-208ENST00000509431 HPS5Q9UPZ3 1129 aa18.69■□□□□ 0.58
HMGCR-208ENST00000509431 TNNT2P45379 298 aaPredicted RBP18.68■□□□□ 0.58
HMGCR-208ENST00000509431 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
HMGCR-208ENST00000509431 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
HMGCR-208ENST00000509431 ZC3H15Q8WU90 426 aaKnown RBP18.68■□□□□ 0.58
HMGCR-208ENST00000509431 GLIS2Q9BZE0 524 aaPredicted RBP18.68■□□□□ 0.58
HMGCR-208ENST00000509431 ZNF408Q9H9D4 720 aa18.68■□□□□ 0.58
HMGCR-208ENST00000509431 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
HMGCR-208ENST00000509431 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
HMGCR-208ENST00000509431 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
HMGCR-208ENST00000509431 COL4A5P29400 1685 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 HUNKP57058 714 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 RNF186Q9NXI6 227 aa18.66■□□□□ 0.58
HMGCR-208ENST00000509431 TRPA1O75762 1119 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms