RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CNBD1Q8NA66 436 aa19.31■□□□□ 0.68
HMGCL-208ENST00000509389 NBPF26B4DH59 902 aa19.3■□□□□ 0.68
HMGCL-208ENST00000509389 NBPF10Q6P3W6 841 aaKnown RBP19.3■□□□□ 0.68
HMGCL-208ENST00000509389 NBPF15Q8N660 670 aa19.3■□□□□ 0.68
HMGCL-208ENST00000509389 NPHP1O15259 732 aa19.29■□□□□ 0.68
HMGCL-208ENST00000509389 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
HMGCL-208ENST00000509389 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
HMGCL-208ENST00000509389 ZNF219Q9P2Y4 722 aaPredicted RBP19.29■□□□□ 0.68
HMGCL-208ENST00000509389 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
HMGCL-208ENST00000509389 C21orf2O43822 256 aa19.28■□□□□ 0.68
HMGCL-208ENST00000509389 ST5P78524 1137 aa19.28■□□□□ 0.68
HMGCL-208ENST00000509389 FER1L6Q2WGJ9 1857 aa19.28■□□□□ 0.68
HMGCL-208ENST00000509389 CACNA1SQ13698 1873 aa19.27■□□□□ 0.68
HMGCL-208ENST00000509389 NEFMP07197 916 aa19.27■□□□□ 0.68
HMGCL-208ENST00000509389 FSTL1Q12841 308 aa19.27■□□□□ 0.68
HMGCL-208ENST00000509389 PLEKHF1Q96S99 279 aa19.27■□□□□ 0.68
HMGCL-208ENST00000509389 SLX4Q8IY92 1834 aa19.27■□□□□ 0.67
HMGCL-208ENST00000509389 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 SRGNP10124 158 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 STYK1Q6J9G0 422 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 DNAJC5GQ8N7S2 189 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 ZNF652Q9Y2D9 606 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 WDR90Q96KV7 1748 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 LAMB4A4D0S4 1761 aa19.26■□□□□ 0.67
HMGCL-208ENST00000509389 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
HMGCL-208ENST00000509389 CCDC184Q52MB2 194 aa19.25■□□□□ 0.67
HMGCL-208ENST00000509389 NBPF5PQ86XG9 351 aaPredicted RBP19.25■□□□□ 0.67
HMGCL-208ENST00000509389 CNKSR1Q969H4 720 aa19.25■□□□□ 0.67
HMGCL-208ENST00000509389 ARFGEF2Q9Y6D5 1785 aa19.25■□□□□ 0.67
HMGCL-208ENST00000509389 NFE2L2Q16236 605 aa19.24■□□□□ 0.67
HMGCL-208ENST00000509389 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
HMGCL-208ENST00000509389 MASTLQ96GX5 879 aa19.24■□□□□ 0.67
HMGCL-208ENST00000509389 RGL2O15211 777 aa19.23■□□□□ 0.67
HMGCL-208ENST00000509389 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
HMGCL-208ENST00000509389 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
HMGCL-208ENST00000509389 VEGFAP15692 232 aaPredicted RBP19.22■□□□□ 0.67
HMGCL-208ENST00000509389 HLFQ16534 295 aa19.22■□□□□ 0.67
HMGCL-208ENST00000509389 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
HMGCL-208ENST00000509389 EIF4A1P60842 406 aaKnown RBP19.21■□□□□ 0.67
HMGCL-208ENST00000509389 TPTE2Q6XPS3 522 aa19.21■□□□□ 0.67
HMGCL-208ENST00000509389 SMC1BQ8NDV3 1235 aa19.21■□□□□ 0.67
HMGCL-208ENST00000509389 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
HMGCL-208ENST00000509389 HTRA3P83110 453 aa19.2■□□□□ 0.66
HMGCL-208ENST00000509389 ERFEQ4G0M1 354 aa19.2■□□□□ 0.66
HMGCL-208ENST00000509389 TAOK3Q9H2K8 898 aa19.2■□□□□ 0.66
HMGCL-208ENST00000509389 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
HMGCL-208ENST00000509389 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
HMGCL-208ENST00000509389 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 DPY19L2Q6NUT2 758 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 NGEFQ8N5V2 710 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 NUP98P52948 1817 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 POTECB2RU33 542 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 NPR1P16066 1061 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 SOGA3Q5TF21 947 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
HMGCL-208ENST00000509389 IFFO2Q5TF58 517 aa19.18■□□□□ 0.66
HMGCL-208ENST00000509389 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
HMGCL-208ENST00000509389 ERVV-1B6SEH8 477 aa19.16■□□□□ 0.66
HMGCL-208ENST00000509389 TTLL7Q6ZT98 887 aa19.16■□□□□ 0.66
HMGCL-208ENST00000509389 KLRG1Q96E93 195 aa19.16■□□□□ 0.66
HMGCL-208ENST00000509389 MAP3K15Q6ZN16 1313 aa19.16■□□□□ 0.66
HMGCL-208ENST00000509389 MYL6BP14649 208 aa19.15■□□□□ 0.66
HMGCL-208ENST00000509389 GTF2E1P29083 439 aaPredicted RBP19.15■□□□□ 0.66
HMGCL-208ENST00000509389 CCDC93Q567U6 631 aa19.15■□□□□ 0.66
HMGCL-208ENST00000509389 KIF6Q6ZMV9 814 aa19.14■□□□□ 0.65
HMGCL-208ENST00000509389 DDNO94850 711 aaPredicted RBP19.13■□□□□ 0.65
HMGCL-208ENST00000509389 RIPK4P57078 832 aa19.13■□□□□ 0.65
HMGCL-208ENST00000509389 TSPYL4Q9UJ04 414 aa19.13■□□□□ 0.65
HMGCL-208ENST00000509389 ABCC12Q96J65 1359 aa19.12■□□□□ 0.65
HMGCL-208ENST00000509389 FKBP4Q02790 459 aaKnown RBP eCLIP19.12■□□□□ 0.65
HMGCL-208ENST00000509389 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
HMGCL-208ENST00000509389 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
HMGCL-208ENST00000509389 NYXQ9GZU5 481 aa19.12■□□□□ 0.65
HMGCL-208ENST00000509389 ZBTB3Q9H5J0 574 aa19.12■□□□□ 0.65
HMGCL-208ENST00000509389 ERBB4Q15303 1308 aa19.11■□□□□ 0.65
HMGCL-208ENST00000509389 GPTP24298 496 aa19.11■□□□□ 0.65
HMGCL-208ENST00000509389 ALDH1B1P30837 517 aa19.11■□□□□ 0.65
HMGCL-208ENST00000509389 JMYQ8N9B5 988 aa19.11■□□□□ 0.65
HMGCL-208ENST00000509389 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
HMGCL-208ENST00000509389 TMPOP42166 694 aaKnown RBP19.1■□□□□ 0.65
HMGCL-208ENST00000509389 CRY2Q49AN0 593 aa19.1■□□□□ 0.65
HMGCL-208ENST00000509389 RTKN2Q8IZC4 609 aa19.1■□□□□ 0.65
HMGCL-208ENST00000509389 ZNF277Q9NRM2 450 aaPredicted RBP19.1■□□□□ 0.65
HMGCL-208ENST00000509389 SUSD4Q5VX71 490 aa19.09■□□□□ 0.65
HMGCL-208ENST00000509389 ZNF34Q8IZ26 560 aa19.09■□□□□ 0.65
HMGCL-208ENST00000509389 IBTKQ9P2D0 1353 aaPredicted RBP19.09■□□□□ 0.65
HMGCL-208ENST00000509389 PDIA6Q15084 440 aa19.08■□□□□ 0.65
HMGCL-208ENST00000509389 GIGYF2Q6Y7W6 1299 aaKnown RBP19.08■□□□□ 0.65
HMGCL-208ENST00000509389 BABAM1Q9NWV8 329 aa19.08■□□□□ 0.65
HMGCL-208ENST00000509389 EIF2S2P20042 333 aaKnown RBP19.07■□□□□ 0.64
HMGCL-208ENST00000509389 LMOD3Q0VAK6 560 aa19.07■□□□□ 0.64
HMGCL-208ENST00000509389 RIC1Q4ADV7 1423 aa19.07■□□□□ 0.64
HMGCL-208ENST00000509389 LRP10Q7Z4F1 713 aa19.07■□□□□ 0.64
HMGCL-208ENST00000509389 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
HMGCL-208ENST00000509389 SCN4AP35499 1836 aa19.07■□□□□ 0.64
HMGCL-208ENST00000509389 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
HMGCL-208ENST00000509389 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms