RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
HTT-205ENST00000509043 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 ANAPC15P60006 121 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 OS9Q13438 667 aaPredicted RBP11.3□□□□□ -0.6
HTT-205ENST00000509043 IL17RAQ96F46 866 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 KIF2CQ99661 725 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
HTT-205ENST00000509043 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
HTT-205ENST00000509043 ST18O60284 1047 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 MYL6BP14649 208 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
HTT-205ENST00000509043 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
HTT-205ENST00000509043 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
HTT-205ENST00000509043 CNTROBQ8N137 903 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
HTT-205ENST00000509043 CHMLP26374 656 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 MCM2P49736 904 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
HTT-205ENST00000509043 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 MYD88Q99836 296 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
HTT-205ENST00000509043 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
HTT-205ENST00000509043 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 HIP1O00291 1037 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
HTT-205ENST00000509043 PTMSP20962 102 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 PI4K2BQ8TCG2 481 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 RUFY2Q8WXA3 655 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
HTT-205ENST00000509043 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 ECHDC1Q9NTX5 307 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 BTG4Q9NY30 223 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.61
HTT-205ENST00000509043 ARFGEF2Q9Y6D5 1785 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 DDIT3P35638 169 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
HTT-205ENST00000509043 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
HTT-205ENST00000509043 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
HTT-205ENST00000509043 STARD3NLO95772 234 aa11.25□□□□□ -0.61
HTT-205ENST00000509043 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
HTT-205ENST00000509043 TRIM28Q13263 835 aaKnown RBP11.25□□□□□ -0.61
HTT-205ENST00000509043 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
HTT-205ENST00000509043 CWC22Q9HCG8 908 aaKnown RBP11.25□□□□□ -0.61
HTT-205ENST00000509043 ATG3Q9NT62 314 aa11.25□□□□□ -0.61
HTT-205ENST00000509043 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
HTT-205ENST00000509043 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
HTT-205ENST00000509043 H7C1W4 665 aa11.24□□□□□ -0.61
HTT-205ENST00000509043 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
HTT-205ENST00000509043 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
HTT-205ENST00000509043 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
HTT-205ENST00000509043 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
HTT-205ENST00000509043 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
HTT-205ENST00000509043 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 A0A087WZG4 1122 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 EXOC5O00471 708 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 CASP7P55210 303 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 RAD50Q92878 1312 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 BCL9O00512 1426 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
HTT-205ENST00000509043 DDX11L8A8MPP1 907 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 SGSM2O43147 1006 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
HTT-205ENST00000509043 AFDNP55196 1824 aaKnown RBP11.22□□□□□ -0.61
HTT-205ENST00000509043 HSP90AB3PQ58FF7 597 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 KIAA1211Q6ZU35 1233 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 UBE3BQ7Z3V4 1068 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 AACSQ86V21 672 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 ANO2Q9NQ90 1003 aa11.22□□□□□ -0.61
HTT-205ENST00000509043 TOM1O60784 492 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 SASH1O94885 1247 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 HSPA4P34932 840 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
HTT-205ENST00000509043 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
HTT-205ENST00000509043 NUCB2P80303 420 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 PIGBQ92521 554 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 GBP4Q96PP9 640 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 SNRKQ9NRH2 765 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
HTT-205ENST00000509043 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.62
HTT-205ENST00000509043 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
HTT-205ENST00000509043 CIAO1O76071 339 aa11.2□□□□□ -0.62
HTT-205ENST00000509043 MCM4P33991 863 aa11.2□□□□□ -0.62
HTT-205ENST00000509043 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
HTT-205ENST00000509043 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms