RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HLFQ16534 295 aa16.5■□□□□ 0.23
PDPN-208ENST00000509009 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
PDPN-208ENST00000509009 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
PDPN-208ENST00000509009 RRAGCQ9HB90 399 aa16.5■□□□□ 0.23
PDPN-208ENST00000509009 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
PDPN-208ENST00000509009 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDPN-208ENST00000509009 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
PDPN-208ENST00000509009 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
PDPN-208ENST00000509009 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
PDPN-208ENST00000509009 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
PDPN-208ENST00000509009 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
PDPN-208ENST00000509009 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
PDPN-208ENST00000509009 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
PDPN-208ENST00000509009 SBF1O95248 1867 aa16.48■□□□□ 0.23
PDPN-208ENST00000509009 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
PDPN-208ENST00000509009 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
PDPN-208ENST00000509009 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
PDPN-208ENST00000509009 ANKRD31Q8N7Z5 1873 aa16.47■□□□□ 0.23
PDPN-208ENST00000509009 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
PDPN-208ENST00000509009 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
PDPN-208ENST00000509009 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
PDPN-208ENST00000509009 TTLL7Q6ZT98 887 aa16.46■□□□□ 0.23
PDPN-208ENST00000509009 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
PDPN-208ENST00000509009 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 MYL6BP14649 208 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
PDPN-208ENST00000509009 C7orf43Q8WVR3 580 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
PDPN-208ENST00000509009 NPR1P16066 1061 aa16.44■□□□□ 0.22
PDPN-208ENST00000509009 APLP1P51693 650 aa16.44■□□□□ 0.22
PDPN-208ENST00000509009 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
PDPN-208ENST00000509009 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
PDPN-208ENST00000509009 FSTL1Q12841 308 aa16.43■□□□□ 0.22
PDPN-208ENST00000509009 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
PDPN-208ENST00000509009 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
PDPN-208ENST00000509009 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
PDPN-208ENST00000509009 BCORQ6W2J9 1755 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
PDPN-208ENST00000509009 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
PDPN-208ENST00000509009 PDIA6Q15084 440 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 ERFEQ4G0M1 354 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 DNAJC5GQ8N7S2 189 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 TAOK3Q9H2K8 898 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
PDPN-208ENST00000509009 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 SLX4Q8IY92 1834 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 POTECB2RU33 542 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
PDPN-208ENST00000509009 CHL1O00533 1208 aa16.4■□□□□ 0.22
PDPN-208ENST00000509009 GPTP24298 496 aa16.4■□□□□ 0.22
PDPN-208ENST00000509009 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
PDPN-208ENST00000509009 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
PDPN-208ENST00000509009 SUSD4Q5VX71 490 aa16.4■□□□□ 0.22
PDPN-208ENST00000509009 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
PDPN-208ENST00000509009 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
PDPN-208ENST00000509009 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
PDPN-208ENST00000509009 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
PDPN-208ENST00000509009 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
PDPN-208ENST00000509009 ANXA1P04083 346 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
PDPN-208ENST00000509009 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
PDPN-208ENST00000509009 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
PDPN-208ENST00000509009 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
PDPN-208ENST00000509009 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
PDPN-208ENST00000509009 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
PDPN-208ENST00000509009 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
PDPN-208ENST00000509009 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
PDPN-208ENST00000509009 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
PDPN-208ENST00000509009 LAS1LQ9Y4W2 734 aaKnown RBP16.36■□□□□ 0.21
PDPN-208ENST00000509009 ABCC12Q96J65 1359 aa16.36■□□□□ 0.21
PDPN-208ENST00000509009 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
PDPN-208ENST00000509009 NTSR2O95665 410 aa16.35■□□□□ 0.21
PDPN-208ENST00000509009 HTRA3P83110 453 aa16.35■□□□□ 0.21
PDPN-208ENST00000509009 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
PDPN-208ENST00000509009 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
PDPN-208ENST00000509009 ZNF277Q9NRM2 450 aaPredicted RBP16.35■□□□□ 0.21
PDPN-208ENST00000509009 PARP10Q53GL7 1025 aa16.34■□□□□ 0.21
PDPN-208ENST00000509009 SLC10A5Q5PT55 438 aa16.34■□□□□ 0.21
PDPN-208ENST00000509009 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
PDPN-208ENST00000509009 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
PDPN-208ENST00000509009 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
PDPN-208ENST00000509009 NUP98P52948 1817 aa16.33■□□□□ 0.21
PDPN-208ENST00000509009 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
PDPN-208ENST00000509009 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms