RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 CASP8AP2Q9UKL3 1982 aa15.47■□□□□ 0.07
NEDD9-212ENST00000508800 LTBP1Q14766 1721 aa15.46■□□□□ 0.07
NEDD9-212ENST00000508800 SRGNP10124 158 aa15.46■□□□□ 0.07
NEDD9-212ENST00000508800 MAP2K2P36507 400 aa15.46■□□□□ 0.07
NEDD9-212ENST00000508800 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
NEDD9-212ENST00000508800 UBR2Q8IWV8 1755 aa15.46■□□□□ 0.07
NEDD9-212ENST00000508800 NPHP1O15259 732 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 STARD3NLO95772 234 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 EIF5P55010 431 aaKnown RBP15.45■□□□□ 0.06
NEDD9-212ENST00000508800 ST5P78524 1137 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 AKAP4Q5JQC9 854 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 MAP1SQ66K74 1059 aaPredicted RBP15.45■□□□□ 0.06
NEDD9-212ENST00000508800 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
NEDD9-212ENST00000508800 CNBD1Q8NA66 436 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
NEDD9-212ENST00000508800 ZNF541Q9H0D2 1346 aa15.44■□□□□ 0.06
NEDD9-212ENST00000508800 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
NEDD9-212ENST00000508800 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
NEDD9-212ENST00000508800 GPC2Q8N158 579 aa15.44■□□□□ 0.06
NEDD9-212ENST00000508800 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
NEDD9-212ENST00000508800 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
NEDD9-212ENST00000508800 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
NEDD9-212ENST00000508800 C7orf43Q8WVR3 580 aa15.42■□□□□ 0.06
NEDD9-212ENST00000508800 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
NEDD9-212ENST00000508800 FZD9O00144 591 aa15.41■□□□□ 0.06
NEDD9-212ENST00000508800 TNNT2P45379 298 aaPredicted RBP15.41■□□□□ 0.06
NEDD9-212ENST00000508800 NPM2Q86SE8 214 aaKnown RBP15.41■□□□□ 0.06
NEDD9-212ENST00000508800 TLL2Q9Y6L7 1015 aa15.41■□□□□ 0.06
NEDD9-212ENST00000508800 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-212ENST00000508800 BRPF1P55201 1214 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-212ENST00000508800 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
NEDD9-212ENST00000508800 CYP4F22Q6NT55 531 aa15.4■□□□□ 0.06
NEDD9-212ENST00000508800 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
NEDD9-212ENST00000508800 TEX13AQ9BXU3 409 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-212ENST00000508800 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 NPR1P16066 1061 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 IL6STP40189 918 aaPredicted RBP15.39■□□□□ 0.05
NEDD9-212ENST00000508800 GRM1Q13255 1194 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 SLC39A6Q13433 755 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 DGKZQ13574 1117 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 HHIPL1Q96JK4 782 aa15.39■□□□□ 0.05
NEDD9-212ENST00000508800 ZNF277Q9NRM2 450 aaPredicted RBP15.39■□□□□ 0.05
NEDD9-212ENST00000508800 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
NEDD9-212ENST00000508800 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
NEDD9-212ENST00000508800 TTC5Q8N0Z6 440 aa15.38■□□□□ 0.05
NEDD9-212ENST00000508800 CCDC24Q8N4L8 307 aa15.38■□□□□ 0.05
NEDD9-212ENST00000508800 TSKSQ9UJT2 592 aa15.37■□□□□ 0.05
NEDD9-212ENST00000508800 KLRG2A4D1S0 409 aaPredicted RBP15.36■□□□□ 0.05
NEDD9-212ENST00000508800 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
NEDD9-212ENST00000508800 USP50Q70EL3 339 aaPredicted RBP15.36■□□□□ 0.05
NEDD9-212ENST00000508800 PSMD1Q99460 953 aa15.36■□□□□ 0.05
NEDD9-212ENST00000508800 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
NEDD9-212ENST00000508800 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
NEDD9-212ENST00000508800 CST9Q5W186 159 aa15.35■□□□□ 0.05
NEDD9-212ENST00000508800 SAPCD2Q86UD0 394 aa15.35■□□□□ 0.05
NEDD9-212ENST00000508800 AOC2O75106 756 aa15.34■□□□□ 0.05
NEDD9-212ENST00000508800 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
NEDD9-212ENST00000508800 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
NEDD9-212ENST00000508800 CLEC4GQ6UXB4 293 aa15.34■□□□□ 0.05
NEDD9-212ENST00000508800 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
NEDD9-212ENST00000508800 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
NEDD9-212ENST00000508800 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
NEDD9-212ENST00000508800 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
NEDD9-212ENST00000508800 SYNE4Q8N205 404 aa15.33■□□□□ 0.04
NEDD9-212ENST00000508800 ZNF652Q9Y2D9 606 aa15.33■□□□□ 0.04
NEDD9-212ENST00000508800 HEG1Q9ULI3 1381 aa15.33■□□□□ 0.04
NEDD9-212ENST00000508800 RGL2O15211 777 aa15.32■□□□□ 0.04
NEDD9-212ENST00000508800 NOGQ13253 232 aa15.32■□□□□ 0.04
NEDD9-212ENST00000508800 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
NEDD9-212ENST00000508800 SCNN1DP51172 638 aa15.31■□□□□ 0.04
NEDD9-212ENST00000508800 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
NEDD9-212ENST00000508800 GCC1Q96CN9 775 aa15.31■□□□□ 0.04
NEDD9-212ENST00000508800 TRAF5O00463 557 aa15.3■□□□□ 0.04
NEDD9-212ENST00000508800 IL13P35225 146 aa15.3■□□□□ 0.04
NEDD9-212ENST00000508800 EPS15P42566 896 aa15.3■□□□□ 0.04
NEDD9-212ENST00000508800 DZIP3Q86Y13 1208 aaKnown RBP15.3■□□□□ 0.04
NEDD9-212ENST00000508800 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
NEDD9-212ENST00000508800 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
NEDD9-212ENST00000508800 CELF2O95319 508 aaKnown RBP15.29■□□□□ 0.04
NEDD9-212ENST00000508800 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEDD9-212ENST00000508800 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
NEDD9-212ENST00000508800 ZNF790Q6PG37 636 aa15.29■□□□□ 0.04
NEDD9-212ENST00000508800 SAGE1Q9NXZ1 904 aa15.29■□□□□ 0.04
NEDD9-212ENST00000508800 SIPA1L3O60292 1781 aaPredicted RBP15.29■□□□□ 0.04
NEDD9-212ENST00000508800 SOX10P56693 466 aa15.28■□□□□ 0.04
NEDD9-212ENST00000508800 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
NEDD9-212ENST00000508800 ADARB2Q9NS39 739 aaKnown RBP15.28■□□□□ 0.04
NEDD9-212ENST00000508800 AKAP11Q9UKA4 1901 aa15.27■□□□□ 0.04
NEDD9-212ENST00000508800 TEFQ10587 303 aa15.27■□□□□ 0.04
NEDD9-212ENST00000508800 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
NEDD9-212ENST00000508800 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
NEDD9-212ENST00000508800 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
NEDD9-212ENST00000508800 LARGE2Q8N3Y3 721 aa15.26■□□□□ 0.03
NEDD9-212ENST00000508800 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
NEDD9-212ENST00000508800 GPRC5DQ9NZD1 345 aa15.26■□□□□ 0.03
NEDD9-212ENST00000508800 COL4A5P29400 1685 aa15.25■□□□□ 0.03
NEDD9-212ENST00000508800 A1BGP04217 495 aa15.25■□□□□ 0.03
NEDD9-212ENST00000508800 MTHFSDQ2M296 383 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms