RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 CASZ1Q86V15 1759 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 ZPR1O75312 459 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 GYS1P13807 737 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
TRIO-212ENST00000508717 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 RCAN3Q9UKA8 241 aa16.82■□□□□ 0.28
TRIO-212ENST00000508717 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
TRIO-212ENST00000508717 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
TRIO-212ENST00000508717 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
TRIO-212ENST00000508717 BCORQ6W2J9 1755 aa16.8■□□□□ 0.28
TRIO-212ENST00000508717 BCAR3O75815 825 aa16.8■□□□□ 0.28
TRIO-212ENST00000508717 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
TRIO-212ENST00000508717 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
TRIO-212ENST00000508717 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
TRIO-212ENST00000508717 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 COL24A1Q17RW2 1714 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 ADCY9O60503 1353 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
TRIO-212ENST00000508717 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
TRIO-212ENST00000508717 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
TRIO-212ENST00000508717 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
TRIO-212ENST00000508717 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
TRIO-212ENST00000508717 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
TRIO-212ENST00000508717 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
TRIO-212ENST00000508717 TM4SF1P30408 202 aa16.78■□□□□ 0.28
TRIO-212ENST00000508717 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
TRIO-212ENST00000508717 HLFQ16534 295 aa16.78■□□□□ 0.28
TRIO-212ENST00000508717 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
TRIO-212ENST00000508717 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
TRIO-212ENST00000508717 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
TRIO-212ENST00000508717 FKBP8Q14318 412 aa16.77■□□□□ 0.28
TRIO-212ENST00000508717 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
TRIO-212ENST00000508717 DNAAF4Q8WXU2 420 aa16.77■□□□□ 0.28
TRIO-212ENST00000508717 ISCA1Q9BUE6 129 aa16.77■□□□□ 0.28
TRIO-212ENST00000508717 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.28
TRIO-212ENST00000508717 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
TRIO-212ENST00000508717 ZBTB3Q9H5J0 574 aa16.77■□□□□ 0.28
TRIO-212ENST00000508717 NUP98P52948 1817 aa16.76■□□□□ 0.27
TRIO-212ENST00000508717 PSDA5PKW4 1024 aaPredicted RBP16.76■□□□□ 0.27
TRIO-212ENST00000508717 ARXQ96QS3 562 aa16.76■□□□□ 0.27
TRIO-212ENST00000508717 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
TRIO-212ENST00000508717 MSH5O43196 834 aa16.75■□□□□ 0.27
TRIO-212ENST00000508717 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
TRIO-212ENST00000508717 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
TRIO-212ENST00000508717 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 NFIXQ14938 502 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 TBC1D9BQ66K14 1250 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
TRIO-212ENST00000508717 ABCC4O15439 1325 aa16.73■□□□□ 0.27
TRIO-212ENST00000508717 TRIM27P14373 513 aa16.73■□□□□ 0.27
TRIO-212ENST00000508717 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
TRIO-212ENST00000508717 CCDC191Q8NCU4 936 aa16.73■□□□□ 0.27
TRIO-212ENST00000508717 SETDB2Q96T68 719 aa16.73■□□□□ 0.27
TRIO-212ENST00000508717 F6X3S4 739 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 MS4A1P11836 297 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.72■□□□□ 0.27
TRIO-212ENST00000508717 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIO-212ENST00000508717 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
TRIO-212ENST00000508717 UBN2Q6ZU65 1347 aa16.71■□□□□ 0.27
TRIO-212ENST00000508717 POLRMTO00411 1230 aaKnown RBP16.71■□□□□ 0.27
TRIO-212ENST00000508717 ALDH1L1O75891 902 aa16.71■□□□□ 0.27
TRIO-212ENST00000508717 PTGER2P43116 358 aa16.71■□□□□ 0.27
TRIO-212ENST00000508717 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
TRIO-212ENST00000508717 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
TRIO-212ENST00000508717 MYD88Q99836 296 aa16.71■□□□□ 0.27
TRIO-212ENST00000508717 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
TRIO-212ENST00000508717 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
TRIO-212ENST00000508717 DDR1Q08345 913 aa16.7■□□□□ 0.26
TRIO-212ENST00000508717 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
TRIO-212ENST00000508717 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
TRIO-212ENST00000508717 MMP10P09238 476 aa16.69■□□□□ 0.26
TRIO-212ENST00000508717 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
TRIO-212ENST00000508717 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
TRIO-212ENST00000508717 NYXQ9GZU5 481 aa16.69■□□□□ 0.26
TRIO-212ENST00000508717 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
TRIO-212ENST00000508717 NRXN2Q9P2S2 1712 aa16.69■□□□□ 0.26
TRIO-212ENST00000508717 ATP5J2-PTCD1G3V325 749 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 NTSR2O95665 410 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 SERPINB2P05120 415 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 POLD1P28340 1107 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 GCKRQ14397 625 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 PPP1R42Q7Z4L9 355 aa16.68■□□□□ 0.26
TRIO-212ENST00000508717 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
TRIO-212ENST00000508717 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
TRIO-212ENST00000508717 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms