RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
TOPBP1-206ENST00000508524 IGFBP4P22692 258 aa10.93□□□□□ -0.66
TOPBP1-206ENST00000508524 TNP2Q05952 138 aa10.93□□□□□ -0.66
TOPBP1-206ENST00000508524 ELOAQ14241 798 aaKnown RBP10.93□□□□□ -0.66
TOPBP1-206ENST00000508524 C2CD2LO14523 706 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 MAPTP10636 758 aaKnown RBP10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 MAP2K3P46734 347 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 CTBSQ01459 385 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 LRRC69Q6ZNQ3 347 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
TOPBP1-206ENST00000508524 WEE1P30291 646 aa10.91□□□□□ -0.66
TOPBP1-206ENST00000508524 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
TOPBP1-206ENST00000508524 STK32AQ8WU08 396 aa10.91□□□□□ -0.66
TOPBP1-206ENST00000508524 KHNYNO15037 678 aaKnown RBP10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 EFSO43281 561 aa10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 ATG7O95352 703 aa10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 PBXIP1Q96AQ6 731 aa10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
TOPBP1-206ENST00000508524 BMP4P12644 408 aa10.89□□□□□ -0.67
TOPBP1-206ENST00000508524 HSH2DQ96JZ2 352 aa10.89□□□□□ -0.67
TOPBP1-206ENST00000508524 OXCT2Q9BYC2 517 aaPredicted RBP10.89□□□□□ -0.67
TOPBP1-206ENST00000508524 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 BCRP11274 1271 aa10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 CD33P20138 364 aa10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 FAM182BQ5T319 152 aa10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 STRN4Q9NRL3 753 aa10.88□□□□□ -0.67
TOPBP1-206ENST00000508524 MAP3K10Q02779 954 aa10.87□□□□□ -0.67
TOPBP1-206ENST00000508524 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
TOPBP1-206ENST00000508524 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
TOPBP1-206ENST00000508524 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
TOPBP1-206ENST00000508524 SUSD3Q96L08 255 aa10.86□□□□□ -0.67
TOPBP1-206ENST00000508524 NEUROD4Q9HD90 331 aa10.86□□□□□ -0.67
TOPBP1-206ENST00000508524 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
TOPBP1-206ENST00000508524 OIP5O43482 229 aa10.85□□□□□ -0.67
TOPBP1-206ENST00000508524 FOXO3O43524 673 aa10.85□□□□□ -0.67
TOPBP1-206ENST00000508524 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
TOPBP1-206ENST00000508524 C1orf229Q6ZS94 237 aaPredicted RBP10.85□□□□□ -0.67
TOPBP1-206ENST00000508524 OCLNQ16625 522 aa10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 RTN1Q16799 776 aa10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 TMEM164Q5U3C3 297 aa10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 ANKIB1Q9P2G1 1089 aa10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 GDF2Q9UK05 429 aaPredicted RBP10.84□□□□□ -0.67
TOPBP1-206ENST00000508524 ARAFP10398 606 aa10.83□□□□□ -0.68
TOPBP1-206ENST00000508524 TYRO3Q06418 890 aa10.83□□□□□ -0.68
TOPBP1-206ENST00000508524 GOLGA6L1Q8N7Z2 621 aa10.83□□□□□ -0.68
TOPBP1-206ENST00000508524 PRMT3O60678 531 aa10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 SLCO4C1Q6ZQN7 724 aa10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
TOPBP1-206ENST00000508524 SHISA8B8ZZ34 492 aa10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 SFSWAPQ12872 951 aaKnown RBP10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 ENAMQ9NRM1 1142 aa10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 KLF15Q9UIH9 416 aa10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
TOPBP1-206ENST00000508524 HIF1AQ16665 826 aa10.8□□□□□ -0.68
TOPBP1-206ENST00000508524 CEP63Q96MT8 703 aa10.8□□□□□ -0.68
TOPBP1-206ENST00000508524 BRD7Q9NPI1 651 aa10.8□□□□□ -0.68
TOPBP1-206ENST00000508524 ZNF468Q5VIY5 522 aaPredicted RBP10.79□□□□□ -0.68
TOPBP1-206ENST00000508524 IER5Q5VY09 327 aa10.79□□□□□ -0.68
TOPBP1-206ENST00000508524 BTLAQ7Z6A9 289 aa10.79□□□□□ -0.68
TOPBP1-206ENST00000508524 GALNT6Q8NCL4 622 aa10.79□□□□□ -0.68
TOPBP1-206ENST00000508524 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
TOPBP1-206ENST00000508524 NEURL1BA8MQ27 555 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 TGFBR3LH3BV60 316 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 GSK3AP49840 483 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 KCNQ4P56696 695 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 NEDD1Q8NHV4 660 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 EDARADDQ8WWZ3 215 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 CLP1Q92989 425 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 MYO19Q96H55 970 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 KLK14Q9P0G3 267 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 SLAIN2Q9P270 581 aa10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 DMGDHQ9UI17 866 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 DNMT3AQ9Y6K1 912 aaPredicted RBP10.78□□□□□ -0.68
TOPBP1-206ENST00000508524 ADH6P28332 368 aa10.77□□□□□ -0.69
TOPBP1-206ENST00000508524 MARSP56192 900 aaKnown RBP10.77□□□□□ -0.69
TOPBP1-206ENST00000508524 PCBP4P57723 403 aaKnown RBP10.77□□□□□ -0.69
TOPBP1-206ENST00000508524 FCHSD1Q86WN1 690 aa10.77□□□□□ -0.69
TOPBP1-206ENST00000508524 SLC30A3Q99726 388 aa10.77□□□□□ -0.69
TOPBP1-206ENST00000508524 EPXP11678 715 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 KCNMA1Q12791 1236 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 DGKZQ13574 1117 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 CXXC1Q9P0U4 656 aaPredicted RBP10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 LRFN2Q9ULH4 789 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
TOPBP1-206ENST00000508524 TIMELESSQ9UNS1 1208 aa10.75□□□□□ -0.69
TOPBP1-206ENST00000508524 KCNH4Q9UQ05 1017 aa10.75□□□□□ -0.69
TOPBP1-206ENST00000508524 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
TOPBP1-206ENST00000508524 SPEM2Q0P670 501 aa10.74□□□□□ -0.69
TOPBP1-206ENST00000508524 RNF225M0QZC1 329 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms