RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 ANKRD13DQ6ZTN6 518 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
TRIM60-203ENST00000508504 SRCAPQ6ZRS2 3230 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 PTPRCP08575 1304 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 HLFQ16534 295 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 MAP3K2Q9Y2U5 619 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 TRAPPC3LQ5T215 181 aa22.25■■□□□ 1.15
TRIM60-203ENST00000508504 PNPLA7Q6ZV29 1317 aa22.25■■□□□ 1.15
TRIM60-203ENST00000508504 CAMTA2O94983 1202 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 SSFA2P28290 1259 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 NPM2Q86SE8 214 aaKnown RBP22.24■■□□□ 1.15
TRIM60-203ENST00000508504 PANK1Q8TE04 598 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 PDGFDQ9GZP0 370 aaPredicted RBP22.24■■□□□ 1.15
TRIM60-203ENST00000508504 MAP3K15Q6ZN16 1313 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 ARFGEF2Q9Y6D5 1785 aa22.24■■□□□ 1.15
TRIM60-203ENST00000508504 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
TRIM60-203ENST00000508504 RIC3Q7Z5B4 369 aa22.23■■□□□ 1.15
TRIM60-203ENST00000508504 COL23A1Q86Y22 540 aaPredicted RBP22.23■■□□□ 1.15
TRIM60-203ENST00000508504 PLBD2Q8NHP8 589 aa22.23■■□□□ 1.15
TRIM60-203ENST00000508504 STK32BQ9NY57 414 aa22.23■■□□□ 1.15
TRIM60-203ENST00000508504 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
TRIM60-203ENST00000508504 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
TRIM60-203ENST00000508504 USPL1Q5W0Q7 1092 aa22.22■■□□□ 1.15
TRIM60-203ENST00000508504 DNAAF4Q8WXU2 420 aa22.22■■□□□ 1.15
TRIM60-203ENST00000508504 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
TRIM60-203ENST00000508504 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
TRIM60-203ENST00000508504 ADRA2BP18089 450 aa22.21■■□□□ 1.15
TRIM60-203ENST00000508504 RFC4P35249 363 aa22.21■■□□□ 1.15
TRIM60-203ENST00000508504 IRX6P78412 446 aaPredicted RBP22.21■■□□□ 1.15
TRIM60-203ENST00000508504 API5Q9BZZ5 524 aaKnown RBP22.21■■□□□ 1.15
TRIM60-203ENST00000508504 ABCC4O15439 1325 aa22.21■■□□□ 1.15
TRIM60-203ENST00000508504 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.15
TRIM60-203ENST00000508504 NARFQ9UHQ1 456 aa22.2■■□□□ 1.15
TRIM60-203ENST00000508504 NUP98P52948 1817 aa22.2■■□□□ 1.14
TRIM60-203ENST00000508504 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
TRIM60-203ENST00000508504 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
TRIM60-203ENST00000508504 A0A087WZG4 1122 aa22.2■■□□□ 1.14
TRIM60-203ENST00000508504 DZIP1LQ8IYY4 767 aaKnown RBP22.2■■□□□ 1.14
TRIM60-203ENST00000508504 ATP5J2-PTCD1G3V325 749 aa22.19■■□□□ 1.14
TRIM60-203ENST00000508504 TMEM57Q8N5G2 664 aa22.19■■□□□ 1.14
TRIM60-203ENST00000508504 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
TRIM60-203ENST00000508504 SCN7AQ01118 1682 aa22.19■■□□□ 1.14
TRIM60-203ENST00000508504 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
TRIM60-203ENST00000508504 MSH5O43196 834 aa22.18■■□□□ 1.14
TRIM60-203ENST00000508504 ZPR1O75312 459 aa22.18■■□□□ 1.14
TRIM60-203ENST00000508504 IGKV5-2P06315 115 aa22.18■■□□□ 1.14
TRIM60-203ENST00000508504 CWF19L2Q2TBE0 894 aaKnown RBP22.18■■□□□ 1.14
TRIM60-203ENST00000508504 GIGYF2Q6Y7W6 1299 aaKnown RBP22.18■■□□□ 1.14
TRIM60-203ENST00000508504 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
TRIM60-203ENST00000508504 MYD88Q99836 296 aa22.18■■□□□ 1.14
TRIM60-203ENST00000508504 METTL22Q9BUU2 404 aaPredicted RBP22.18■■□□□ 1.14
TRIM60-203ENST00000508504 BEND3Q5T5X7 828 aa22.17■■□□□ 1.14
TRIM60-203ENST00000508504 GYS1P13807 737 aa22.17■■□□□ 1.14
TRIM60-203ENST00000508504 GPTP24298 496 aa22.17■■□□□ 1.14
TRIM60-203ENST00000508504 FKBP8Q14318 412 aa22.17■■□□□ 1.14
TRIM60-203ENST00000508504 QSER1Q2KHR3 1735 aa22.16■■□□□ 1.14
TRIM60-203ENST00000508504 R3HDM1Q15032 1099 aaKnown RBP22.16■■□□□ 1.14
TRIM60-203ENST00000508504 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
TRIM60-203ENST00000508504 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
TRIM60-203ENST00000508504 PDE3AQ14432 1141 aa22.14■■□□□ 1.14
TRIM60-203ENST00000508504 TBC1D9BQ66K14 1250 aa22.14■■□□□ 1.14
TRIM60-203ENST00000508504 UBN2Q6ZU65 1347 aa22.14■■□□□ 1.14
TRIM60-203ENST00000508504 PSDA5PKW4 1024 aaPredicted RBP22.14■■□□□ 1.13
TRIM60-203ENST00000508504 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
TRIM60-203ENST00000508504 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
TRIM60-203ENST00000508504 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
TRIM60-203ENST00000508504 PXDNLA1KZ92 1463 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 NEURL1BA8MQ27 555 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 ITPRIPQ8IWB1 547 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 LINS1Q8NG48 757 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 ISCA1Q9BUE6 129 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
TRIM60-203ENST00000508504 ANKRD36CQ5JPF3 1778 aa22.12■■□□□ 1.13
TRIM60-203ENST00000508504 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
TRIM60-203ENST00000508504 ZNF34Q8IZ26 560 aa22.12■■□□□ 1.13
TRIM60-203ENST00000508504 SRCIN1Q9C0H9 1055 aa22.12■■□□□ 1.13
TRIM60-203ENST00000508504 N4BP2Q86UW6 1770 aaPredicted RBP22.12■■□□□ 1.13
TRIM60-203ENST00000508504 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
TRIM60-203ENST00000508504 NEXNQ0ZGT2 675 aa22.11■■□□□ 1.13
TRIM60-203ENST00000508504 CRBNQ96SW2 442 aa22.11■■□□□ 1.13
TRIM60-203ENST00000508504 NIP7Q9Y221 180 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRIM60-203ENST00000508504 AFDNP55196 1824 aaKnown RBP22.11■■□□□ 1.13
TRIM60-203ENST00000508504 SOCS7O14512 581 aa22.11■■□□□ 1.13
TRIM60-203ENST00000508504 CCT4P50991 539 aaKnown RBP22.11■■□□□ 1.13
TRIM60-203ENST00000508504 JARID2Q92833 1246 aaPredicted RBP22.11■■□□□ 1.13
TRIM60-203ENST00000508504 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
TRIM60-203ENST00000508504 MVPQ14764 893 aaKnown RBP22.1■■□□□ 1.13
TRIM60-203ENST00000508504 NFIXQ14938 502 aa22.1■■□□□ 1.13
TRIM60-203ENST00000508504 NLRP10Q86W26 655 aa22.1■■□□□ 1.13
TRIM60-203ENST00000508504 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
TRIM60-203ENST00000508504 MS4A1P11836 297 aa22.08■■□□□ 1.13
TRIM60-203ENST00000508504 GCKRQ14397 625 aa22.08■■□□□ 1.13
TRIM60-203ENST00000508504 HSP90AB3PQ58FF7 597 aa22.08■■□□□ 1.13
TRIM60-203ENST00000508504 RTL5Q5HYW3 569 aaPredicted RBP22.08■■□□□ 1.13
TRIM60-203ENST00000508504 TRIM28Q13263 835 aaKnown RBP22.07■■□□□ 1.12
TRIM60-203ENST00000508504 SUSD4Q5VX71 490 aa22.07■■□□□ 1.12
TRIM60-203ENST00000508504 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms