RNA–Protein interactions for RNA: ENST00000508438.1

SH3TC1-215, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 515 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-215ENST00000508438 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
SH3TC1-215ENST00000508438 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-215ENST00000508438 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
SH3TC1-215ENST00000508438 RBM46Q8TBY0 533 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-215ENST00000508438 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
SH3TC1-215ENST00000508438 C21orf2O43822 256 aa17.13■□□□□ 0.33
SH3TC1-215ENST00000508438 ST5P78524 1137 aa17.13■□□□□ 0.33
SH3TC1-215ENST00000508438 NPHP1O15259 732 aa17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 SRGNP10124 158 aa17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 APLP1P51693 650 aa17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 ZNF652Q9Y2D9 606 aa17.12■□□□□ 0.33
SH3TC1-215ENST00000508438 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
SH3TC1-215ENST00000508438 RGL2O15211 777 aa17.11■□□□□ 0.33
SH3TC1-215ENST00000508438 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
SH3TC1-215ENST00000508438 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
SH3TC1-215ENST00000508438 NUP98P52948 1817 aa17.11■□□□□ 0.33
SH3TC1-215ENST00000508438 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 HLFQ16534 295 aa17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
SH3TC1-215ENST00000508438 RALBP1Q15311 655 aa17.09■□□□□ 0.33
SH3TC1-215ENST00000508438 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-215ENST00000508438 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
SH3TC1-215ENST00000508438 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
SH3TC1-215ENST00000508438 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
SH3TC1-215ENST00000508438 FSTL1Q12841 308 aa17.08■□□□□ 0.32
SH3TC1-215ENST00000508438 KLRG2A4D1S0 409 aaPredicted RBP17.07■□□□□ 0.32
SH3TC1-215ENST00000508438 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
SH3TC1-215ENST00000508438 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
SH3TC1-215ENST00000508438 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
SH3TC1-215ENST00000508438 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
SH3TC1-215ENST00000508438 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
SH3TC1-215ENST00000508438 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
SH3TC1-215ENST00000508438 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-215ENST00000508438 POTECB2RU33 542 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 NPR1P16066 1061 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 TTLL7Q6ZT98 887 aa17.05■□□□□ 0.32
SH3TC1-215ENST00000508438 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
SH3TC1-215ENST00000508438 MYL6BP14649 208 aa17.04■□□□□ 0.32
SH3TC1-215ENST00000508438 RIPK4P57078 832 aa17.04■□□□□ 0.32
SH3TC1-215ENST00000508438 HTRA3P83110 453 aa17.04■□□□□ 0.32
SH3TC1-215ENST00000508438 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
SH3TC1-215ENST00000508438 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
SH3TC1-215ENST00000508438 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
SH3TC1-215ENST00000508438 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-215ENST00000508438 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-215ENST00000508438 DPY19L2Q6NUT2 758 aa17.02■□□□□ 0.32
SH3TC1-215ENST00000508438 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
SH3TC1-215ENST00000508438 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
SH3TC1-215ENST00000508438 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
SH3TC1-215ENST00000508438 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
SH3TC1-215ENST00000508438 IBTKQ9P2D0 1353 aaPredicted RBP17■□□□□ 0.31
SH3TC1-215ENST00000508438 GPTP24298 496 aa16.99■□□□□ 0.31
SH3TC1-215ENST00000508438 PDIA6Q15084 440 aa16.99■□□□□ 0.31
SH3TC1-215ENST00000508438 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
SH3TC1-215ENST00000508438 ZNF34Q8IZ26 560 aa16.99■□□□□ 0.31
SH3TC1-215ENST00000508438 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
SH3TC1-215ENST00000508438 RIC1Q4ADV7 1423 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 SNED1Q8TER0 1413 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 DDNO94850 711 aaPredicted RBP16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 GIGYF2Q6Y7W6 1299 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 CCDC146Q8IYE0 955 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
SH3TC1-215ENST00000508438 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
SH3TC1-215ENST00000508438 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
SH3TC1-215ENST00000508438 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
SH3TC1-215ENST00000508438 SCN4AP35499 1836 aa16.96■□□□□ 0.31
SH3TC1-215ENST00000508438 NTSR2O95665 410 aa16.96■□□□□ 0.31
SH3TC1-215ENST00000508438 ANXA1P04083 346 aa16.96■□□□□ 0.31
SH3TC1-215ENST00000508438 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
SH3TC1-215ENST00000508438 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
SH3TC1-215ENST00000508438 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
SH3TC1-215ENST00000508438 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
SH3TC1-215ENST00000508438 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
SH3TC1-215ENST00000508438 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
SH3TC1-215ENST00000508438 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
SH3TC1-215ENST00000508438 C3orf67Q6ZVT6 689 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms