RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
DHFR-204ENST00000508282 PHF24Q9UPV7 400 aa10.14□□□□□ -0.79
DHFR-204ENST00000508282 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
DHFR-204ENST00000508282 MX2P20592 715 aa10.13□□□□□ -0.79
DHFR-204ENST00000508282 NGLY1Q96IV0 654 aa10.13□□□□□ -0.79
DHFR-204ENST00000508282 PRIMPOLQ96LW4 560 aa10.13□□□□□ -0.79
DHFR-204ENST00000508282 GJA3Q9Y6H8 435 aa10.13□□□□□ -0.79
DHFR-204ENST00000508282 IGF1RP08069 1367 aa10.13□□□□□ -0.79
DHFR-204ENST00000508282 OCLNQ16625 522 aa10.12□□□□□ -0.79
DHFR-204ENST00000508282 SAMD5Q5TGI4 173 aa10.12□□□□□ -0.79
DHFR-204ENST00000508282 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
DHFR-204ENST00000508282 DCDC2BA2VCK2 349 aa10.11□□□□□ -0.79
DHFR-204ENST00000508282 FOXO3O43524 673 aa10.11□□□□□ -0.79
DHFR-204ENST00000508282 PRMT3O60678 531 aa10.11□□□□□ -0.79
DHFR-204ENST00000508282 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
DHFR-204ENST00000508282 FGFR3P22607 806 aa10.11□□□□□ -0.79
DHFR-204ENST00000508282 TNP2Q05952 138 aa10.11□□□□□ -0.79
DHFR-204ENST00000508282 FAM157BP0CG42 384 aa10.1□□□□□ -0.79
DHFR-204ENST00000508282 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
DHFR-204ENST00000508282 CTBSQ01459 385 aa10.1□□□□□ -0.79
DHFR-204ENST00000508282 ZNF385CQ66K41 422 aaPredicted RBP10.1□□□□□ -0.79
DHFR-204ENST00000508282 HSH2DQ96JZ2 352 aa10.1□□□□□ -0.79
DHFR-204ENST00000508282 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
DHFR-204ENST00000508282 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
DHFR-204ENST00000508282 C2CD2LO14523 706 aa10.09□□□□□ -0.79
DHFR-204ENST00000508282 KHNYNO15037 678 aaKnown RBP10.09□□□□□ -0.79
DHFR-204ENST00000508282 FKBP5Q13451 457 aaPredicted RBP10.09□□□□□ -0.79
DHFR-204ENST00000508282 ZNF280CQ8ND82 737 aa10.09□□□□□ -0.79
DHFR-204ENST00000508282 SUSD3Q96L08 255 aa10.09□□□□□ -0.79
DHFR-204ENST00000508282 NEUROD4Q9HD90 331 aa10.09□□□□□ -0.79
DHFR-204ENST00000508282 EFSO43281 561 aa10.08□□□□□ -0.8
DHFR-204ENST00000508282 RTN1Q16799 776 aa10.08□□□□□ -0.8
DHFR-204ENST00000508282 LYPD4Q6UWN0 246 aa10.08□□□□□ -0.8
DHFR-204ENST00000508282 CLP1Q92989 425 aaKnown RBP10.08□□□□□ -0.8
DHFR-204ENST00000508282 ARID3AQ99856 593 aa10.08□□□□□ -0.8
DHFR-204ENST00000508282 QTRT2Q9H974 415 aaKnown RBP10.08□□□□□ -0.8
DHFR-204ENST00000508282 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
DHFR-204ENST00000508282 CD33P20138 364 aa10.07□□□□□ -0.8
DHFR-204ENST00000508282 MAP2K3P46734 347 aa10.07□□□□□ -0.8
DHFR-204ENST00000508282 ACDQ96AP0 544 aa10.07□□□□□ -0.8
DHFR-204ENST00000508282 NSFL1CQ9UNZ2 370 aaKnown RBP10.07□□□□□ -0.8
DHFR-204ENST00000508282 BMP4P12644 408 aa10.06□□□□□ -0.8
DHFR-204ENST00000508282 SVOPQ8N4V2 548 aa10.06□□□□□ -0.8
DHFR-204ENST00000508282 VTI1AQ96AJ9 217 aa10.06□□□□□ -0.8
DHFR-204ENST00000508282 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
DHFR-204ENST00000508282 ANKIB1Q9P2G1 1089 aa10.06□□□□□ -0.8
DHFR-204ENST00000508282 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
DHFR-204ENST00000508282 BCS1LQ9Y276 419 aa10.05□□□□□ -0.8
DHFR-204ENST00000508282 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
DHFR-204ENST00000508282 LAMC2Q13753 1193 aa10.04□□□□□ -0.8
DHFR-204ENST00000508282 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
DHFR-204ENST00000508282 OXCT2Q9BYC2 517 aaPredicted RBP10.04□□□□□ -0.8
DHFR-204ENST00000508282 KLK14Q9P0G3 267 aa10.04□□□□□ -0.8
DHFR-204ENST00000508282 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 TYRO3Q06418 890 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
DHFR-204ENST00000508282 CAPN12Q6ZSI9 719 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 MYO19Q96H55 970 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 CEP63Q96MT8 703 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 MARK1Q9P0L2 795 aa10.03□□□□□ -0.8
DHFR-204ENST00000508282 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 DGKZQ13574 1117 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 GRIN2CQ14957 1233 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 HIF1AQ16665 826 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 BTLAQ7Z6A9 289 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 BRD7Q9NPI1 651 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 LRFN2Q9ULH4 789 aa10.02□□□□□ -0.81
DHFR-204ENST00000508282 BCRP11274 1271 aa10.01□□□□□ -0.81
DHFR-204ENST00000508282 IER5Q5VY09 327 aa10.01□□□□□ -0.81
DHFR-204ENST00000508282 MKNK1Q9BUB5 465 aa10.01□□□□□ -0.81
DHFR-204ENST00000508282 DMGDHQ9UI17 866 aaKnown RBP10.01□□□□□ -0.81
DHFR-204ENST00000508282 CARNS1A5YM72 827 aa10□□□□□ -0.81
DHFR-204ENST00000508282 TGFBR3LH3BV60 316 aa10□□□□□ -0.81
DHFR-204ENST00000508282 ATP2B4P23634 1241 aa10□□□□□ -0.81
DHFR-204ENST00000508282 COX20Q5RI15 118 aa10□□□□□ -0.81
DHFR-204ENST00000508282 C1orf229Q6ZS94 237 aaPredicted RBP10□□□□□ -0.81
DHFR-204ENST00000508282 COL26A1Q96A83 441 aa10□□□□□ -0.81
DHFR-204ENST00000508282 SAP130Q9H0E3 1048 aa10□□□□□ -0.81
DHFR-204ENST00000508282 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
DHFR-204ENST00000508282 ARAFP10398 606 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 KCNQ4P56696 695 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 MAP3K10Q02779 954 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 C11orf91Q3C1V1 193 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 KLF15Q9UIH9 416 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 GGA1Q9UJY5 639 aa9.99□□□□□ -0.81
DHFR-204ENST00000508282 OIP5O43482 229 aa9.98□□□□□ -0.81
DHFR-204ENST00000508282 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
DHFR-204ENST00000508282 SLC30A3Q99726 388 aa9.98□□□□□ -0.81
DHFR-204ENST00000508282 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
DHFR-204ENST00000508282 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
DHFR-204ENST00000508282 ADAMTS8Q9UP79 889 aa9.98□□□□□ -0.81
DHFR-204ENST00000508282 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
DHFR-204ENST00000508282 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
DHFR-204ENST00000508282 ZNF468Q5VIY5 522 aaPredicted RBP9.97□□□□□ -0.81
DHFR-204ENST00000508282 KCNH4Q9UQ05 1017 aa9.97□□□□□ -0.81
DHFR-204ENST00000508282 C16orf46Q6P387 395 aa9.96□□□□□ -0.82
DHFR-204ENST00000508282 SLCO4C1Q6ZQN7 724 aa9.96□□□□□ -0.82
DHFR-204ENST00000508282 IFT43Q96FT9 208 aa9.96□□□□□ -0.82
DHFR-204ENST00000508282 AVENQ9NQS1 362 aaPredicted RBP9.96□□□□□ -0.82
DHFR-204ENST00000508282 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms