RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 CHL1O00533 1208 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 KCNA3P22001 575 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 HLFQ16534 295 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 CNBD1Q8NA66 436 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 BABAM1Q9NWV8 329 aa12.23□□□□□ -0.45
DDX41-209ENST00000508279 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX41-209ENST00000508279 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
DDX41-209ENST00000508279 ST5P78524 1137 aa12.22□□□□□ -0.45
DDX41-209ENST00000508279 DALRD3Q5D0E6 543 aaKnown RBP12.22□□□□□ -0.45
DDX41-209ENST00000508279 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
DDX41-209ENST00000508279 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
DDX41-209ENST00000508279 FAM9BQ8IZU0 186 aa12.22□□□□□ -0.45
DDX41-209ENST00000508279 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
DDX41-209ENST00000508279 H0YIN7 160 aa12.21□□□□□ -0.45
DDX41-209ENST00000508279 AIMP1Q12904 312 aaKnown RBP12.21□□□□□ -0.45
DDX41-209ENST00000508279 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
DDX41-209ENST00000508279 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
DDX41-209ENST00000508279 ZNF784Q8NCA9 323 aaPredicted RBP12.21□□□□□ -0.45
DDX41-209ENST00000508279 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.452e-10■■■□□ 15.2
DDX41-209ENST00000508279 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
DDX41-209ENST00000508279 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
DDX41-209ENST00000508279 DLEC1Q9Y238 1755 aa12.2□□□□□ -0.46
DDX41-209ENST00000508279 MAP3K15Q6ZN16 1313 aa12.2□□□□□ -0.46
DDX41-209ENST00000508279 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
DDX41-209ENST00000508279 GPTP24298 496 aa12.2□□□□□ -0.46
DDX41-209ENST00000508279 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
DDX41-209ENST00000508279 GNAI1P63096 354 aa12.2□□□□□ -0.46
DDX41-209ENST00000508279 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
DDX41-209ENST00000508279 HDGFL1Q5TGJ6 251 aa12.2□□□□□ -0.46
DDX41-209ENST00000508279 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
DDX41-209ENST00000508279 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
DDX41-209ENST00000508279 PDE6BP35913 854 aa12.19□□□□□ -0.46
DDX41-209ENST00000508279 DUSP27Q5VZP5 1158 aa12.19□□□□□ -0.46
DDX41-209ENST00000508279 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
DDX41-209ENST00000508279 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
DDX41-209ENST00000508279 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
DDX41-209ENST00000508279 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 PDIA6Q15084 440 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 TPTE2Q6XPS3 522 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
DDX41-209ENST00000508279 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
DDX41-209ENST00000508279 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
DDX41-209ENST00000508279 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
DDX41-209ENST00000508279 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
DDX41-209ENST00000508279 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
DDX41-209ENST00000508279 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
DDX41-209ENST00000508279 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX41-209ENST00000508279 ANKRD36CQ5JPF3 1778 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 SBF1O95248 1867 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 RASSF7Q02833 373 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 PDZRN3Q9UPQ7 1066 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
DDX41-209ENST00000508279 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 RGL2O15211 777 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 C21orf2O43822 256 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 HOXB7P09629 217 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 MASTLQ96GX5 879 aa12.14□□□□□ -0.47
DDX41-209ENST00000508279 DBF4Q9UBU7 674 aaPredicted RBP12.14□□□□□ -0.47
DDX41-209ENST00000508279 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
DDX41-209ENST00000508279 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
DDX41-209ENST00000508279 SRGNP10124 158 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 TSPYL6Q8N831 410 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 CNKSR1Q969H4 720 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
DDX41-209ENST00000508279 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
DDX41-209ENST00000508279 HSP90AB3PQ58FF7 597 aa12.12□□□□□ -0.47
DDX41-209ENST00000508279 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
DDX41-209ENST00000508279 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
DDX41-209ENST00000508279 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
DDX41-209ENST00000508279 UTP14AQ9BVJ6 771 aaKnown RBP12.12□□□□□ -0.47
DDX41-209ENST00000508279 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
DDX41-209ENST00000508279 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
DDX41-209ENST00000508279 NTSR2O95665 410 aa12.11□□□□□ -0.47
DDX41-209ENST00000508279 NPR1P16066 1061 aa12.11□□□□□ -0.47
DDX41-209ENST00000508279 PARP10Q53GL7 1025 aa12.11□□□□□ -0.47
DDX41-209ENST00000508279 CCDC30Q5VVM6 783 aa12.11□□□□□ -0.47
DDX41-209ENST00000508279 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
DDX41-209ENST00000508279 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
DDX41-209ENST00000508279 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
DDX41-209ENST00000508279 ADCY9O60503 1353 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms