RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 ZNF417Q8TAU3 575 aa9.48□□□□□ -0.89
CCSER1-206ENST00000508086 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
CCSER1-206ENST00000508086 ZNF587Q96SQ5 575 aaPredicted RBP9.48□□□□□ -0.89
CCSER1-206ENST00000508086 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
CCSER1-206ENST00000508086 A6NJR5 290 aa9.47□□□□□ -0.89
CCSER1-206ENST00000508086 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
CCSER1-206ENST00000508086 ZDHHC3Q9NYG2 299 aa9.47□□□□□ -0.89
CCSER1-206ENST00000508086 LAMC2Q13753 1193 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 EML3Q32P44 896 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 LCE3BQ5TA77 95 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 PCDHGA11Q9Y5H2 935 aa9.46□□□□□ -0.9
CCSER1-206ENST00000508086 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
CCSER1-206ENST00000508086 NCOA4Q13772 614 aa9.45□□□□□ -0.9
CCSER1-206ENST00000508086 GRIK4Q16099 956 aa9.45□□□□□ -0.9
CCSER1-206ENST00000508086 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
CCSER1-206ENST00000508086 PARP3Q9Y6F1 533 aa9.45□□□□□ -0.9
CCSER1-206ENST00000508086 CDK2AP1O14519 115 aa9.44□□□□□ -0.9
CCSER1-206ENST00000508086 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
CCSER1-206ENST00000508086 TRAPPC3LQ5T215 181 aa9.44□□□□□ -0.9
CCSER1-206ENST00000508086 A6NJY4 79 aa9.43□□□□□ -0.9
CCSER1-206ENST00000508086 TMEM229AB2RXF0 380 aa9.43□□□□□ -0.9
CCSER1-206ENST00000508086 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
CCSER1-206ENST00000508086 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
CCSER1-206ENST00000508086 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
CCSER1-206ENST00000508086 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
CCSER1-206ENST00000508086 GLMNQ92990 594 aa9.42□□□□□ -0.9
CCSER1-206ENST00000508086 C9orf172C9J069 976 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 ATP9BO43861 1147 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 SIN3BO75182 1162 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 GTF2IP78347 998 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
CCSER1-206ENST00000508086 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 BTBD11A6QL63 1104 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 LRP8Q14114 963 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
CCSER1-206ENST00000508086 EFSO43281 561 aa9.39□□□□□ -0.91
CCSER1-206ENST00000508086 MTFR1Q15390 333 aa9.39□□□□□ -0.91
CCSER1-206ENST00000508086 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
CCSER1-206ENST00000508086 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CCSER1-206ENST00000508086 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
CCSER1-206ENST00000508086 BACH1O14867 736 aa9.38□□□□□ -0.91
CCSER1-206ENST00000508086 ALBP02768 609 aa9.38□□□□□ -0.91
CCSER1-206ENST00000508086 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
CCSER1-206ENST00000508086 TXLNAP40222 546 aa9.37□□□□□ -0.91
CCSER1-206ENST00000508086 ADH7P40394 386 aa9.37□□□□□ -0.91
CCSER1-206ENST00000508086 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
CCSER1-206ENST00000508086 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
CCSER1-206ENST00000508086 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
CCSER1-206ENST00000508086 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 PRDM6Q9NQX0 595 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 ZNF358Q9NW07 568 aa9.36□□□□□ -0.91
CCSER1-206ENST00000508086 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
CCSER1-206ENST00000508086 ZBTB7BO15156 539 aaPredicted RBP9.35□□□□□ -0.91
CCSER1-206ENST00000508086 HYAL3O43820 417 aaPredicted RBP9.35□□□□□ -0.91
CCSER1-206ENST00000508086 LILRB5O75023 590 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 RAC1P63000 192 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 CLDN10P78369 228 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 PSME1Q06323 249 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 RAB44Q7Z6P3 723 aaPredicted RBP9.35□□□□□ -0.91
CCSER1-206ENST00000508086 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCSER1-206ENST00000508086 L3MBTL2Q969R5 705 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 KRTAP4-12Q9BQ66 201 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 USP21Q9UK80 565 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
CCSER1-206ENST00000508086 NRG1Q02297 640 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-206ENST00000508086 SPEM2Q0P670 501 aa9.34□□□□□ -0.91
CCSER1-206ENST00000508086 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
CCSER1-206ENST00000508086 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
CCSER1-206ENST00000508086 IGFLR1Q9H665 355 aa9.34□□□□□ -0.91
CCSER1-206ENST00000508086 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
CCSER1-206ENST00000508086 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
CCSER1-206ENST00000508086 ATP1A2P50993 1020 aa9.33□□□□□ -0.92
CCSER1-206ENST00000508086 EPHA4P54764 986 aa9.33□□□□□ -0.92
CCSER1-206ENST00000508086 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
CCSER1-206ENST00000508086 MKRN1Q9UHC7 482 aaKnown RBP9.33□□□□□ -0.92
CCSER1-206ENST00000508086 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-206ENST00000508086 NID1P14543 1247 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 ELNP15502 786 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
CCSER1-206ENST00000508086 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 MBTPS1Q14703 1052 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 PPP1R12CQ9BZL4 782 aa9.32□□□□□ -0.92
CCSER1-206ENST00000508086 NOS2P35228 1153 aa9.31□□□□□ -0.92
CCSER1-206ENST00000508086 LARGE2Q8N3Y3 721 aa9.31□□□□□ -0.92
CCSER1-206ENST00000508086 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
CCSER1-206ENST00000508086 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
CCSER1-206ENST00000508086 MDFIQ99750 246 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms