RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 PRAMEF22A3QJZ6 481 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 ST5P78524 1137 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 DDX10Q13206 875 aaKnown RBP14.62□□□□□ -0.07
PTPN13-207ENST00000508063 PRR5LQ6MZQ0 368 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 CNBD1Q8NA66 436 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 RNF181Q9P0P0 153 aa14.62□□□□□ -0.07
PTPN13-207ENST00000508063 KIF3CO14782 793 aa14.61□□□□□ -0.07
PTPN13-207ENST00000508063 ZNF622Q969S3 477 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTPN13-207ENST00000508063 MIS18AQ9NYP9 233 aa14.61□□□□□ -0.07
PTPN13-207ENST00000508063 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
PTPN13-207ENST00000508063 MYBBP1AQ9BQG0 1328 aaKnown RBP14.61□□□□□ -0.07
PTPN13-207ENST00000508063 LAMB4A4D0S4 1761 aa14.6□□□□□ -0.07
PTPN13-207ENST00000508063 PIP4K2AP48426 406 aaPredicted RBP14.6□□□□□ -0.07
PTPN13-207ENST00000508063 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
PTPN13-207ENST00000508063 ZC3H4Q9UPT8 1303 aaKnown RBP14.6□□□□□ -0.07
PTPN13-207ENST00000508063 KDM3BQ7LBC6 1761 aa14.6□□□□□ -0.07
PTPN13-207ENST00000508063 NBPF26B4DH59 902 aa14.59□□□□□ -0.07
PTPN13-207ENST00000508063 NBPF10Q6P3W6 841 aaKnown RBP14.59□□□□□ -0.07
PTPN13-207ENST00000508063 NBPF5PQ86XG9 351 aaPredicted RBP14.59□□□□□ -0.07
PTPN13-207ENST00000508063 NBPF15Q8N660 670 aa14.59□□□□□ -0.07
PTPN13-207ENST00000508063 SBF1O95248 1867 aa14.59□□□□□ -0.07
PTPN13-207ENST00000508063 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
PTPN13-207ENST00000508063 TOMM70O94826 608 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 HSPA6P17066 643 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 LMNB1P20700 586 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 RIPK4P57078 832 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 EIF4A1P60842 406 aaKnown RBP14.58□□□□□ -0.08
PTPN13-207ENST00000508063 STYK1Q6J9G0 422 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 C16orf71Q8IYS4 520 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-207ENST00000508063 CNKSR1Q969H4 720 aa14.58□□□□□ -0.08
PTPN13-207ENST00000508063 RASSF7Q02833 373 aa14.57□□□□□ -0.08
PTPN13-207ENST00000508063 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN13-207ENST00000508063 THUMPD2Q9BTF0 503 aaKnown RBP14.57□□□□□ -0.08
PTPN13-207ENST00000508063 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
PTPN13-207ENST00000508063 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN13-207ENST00000508063 SRGNP10124 158 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 SOGA3Q5TF21 947 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 KIF6Q6ZMV9 814 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 CCDC24Q8N4L8 307 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 MASTLQ96GX5 879 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 NMRK2Q9NPI5 230 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
PTPN13-207ENST00000508063 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
PTPN13-207ENST00000508063 TMPOP42166 694 aaKnown RBP14.55□□□□□ -0.08
PTPN13-207ENST00000508063 RRP7AQ9Y3A4 280 aaKnown RBP14.55□□□□□ -0.08
PTPN13-207ENST00000508063 ERBB4Q15303 1308 aa14.55□□□□□ -0.08
PTPN13-207ENST00000508063 COL11A2P13942 1736 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-207ENST00000508063 C21orf2O43822 256 aa14.54□□□□□ -0.08
PTPN13-207ENST00000508063 GTF2E1P29083 439 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-207ENST00000508063 NGEFQ8N5V2 710 aa14.54□□□□□ -0.08
PTPN13-207ENST00000508063 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
PTPN13-207ENST00000508063 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
PTPN13-207ENST00000508063 MAP3K15Q6ZN16 1313 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 NFKBIEO00221 500 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 MYL6BP14649 208 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 NPR1P16066 1061 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 HLFQ16534 295 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 RBM46Q8TBY0 533 aaKnown RBP14.53□□□□□ -0.08
PTPN13-207ENST00000508063 RUNDC1Q96C34 613 aa14.53□□□□□ -0.08
PTPN13-207ENST00000508063 ARFGEF2Q9Y6D5 1785 aa14.52□□□□□ -0.08
PTPN13-207ENST00000508063 LTBP3Q9NS15 1303 aa14.52□□□□□ -0.08
PTPN13-207ENST00000508063 GLTPD2A6NH11 291 aa14.52□□□□□ -0.09
PTPN13-207ENST00000508063 PRPF40BQ6NWY9 871 aaKnown RBP14.52□□□□□ -0.09
PTPN13-207ENST00000508063 RRAGCQ9HB90 399 aa14.52□□□□□ -0.09
PTPN13-207ENST00000508063 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.09
PTPN13-207ENST00000508063 CACNA1SQ13698 1873 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 FER1L6Q2WGJ9 1857 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 KLRG2A4D1S0 409 aaPredicted RBP14.51□□□□□ -0.09
PTPN13-207ENST00000508063 FAM177BA6PVY3 158 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 APLP1P51693 650 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 FSTL1Q12841 308 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 DPY19L2Q6NUT2 758 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
PTPN13-207ENST00000508063 NUP98P52948 1817 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 SLX4Q8IY92 1834 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 TIAM2Q8IVF5 1701 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 ALDH1B1P30837 517 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 ERFEQ4G0M1 354 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 CCDC146Q8IYE0 955 aa14.5□□□□□ -0.09
PTPN13-207ENST00000508063 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
PTPN13-207ENST00000508063 DICER1Q9UPY3 1922 aaKnown RBP14.49□□□□□ -0.09
PTPN13-207ENST00000508063 VEGFAP15692 232 aaPredicted RBP14.49□□□□□ -0.09
PTPN13-207ENST00000508063 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
PTPN13-207ENST00000508063 PRELPP51888 382 aa14.49□□□□□ -0.09
PTPN13-207ENST00000508063 CCDC93Q567U6 631 aa14.49□□□□□ -0.09
PTPN13-207ENST00000508063 TTLL7Q6ZT98 887 aa14.49□□□□□ -0.09
PTPN13-207ENST00000508063 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
PTPN13-207ENST00000508063 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
PTPN13-207ENST00000508063 GIGYF2Q6Y7W6 1299 aaKnown RBP14.48□□□□□ -0.09
PTPN13-207ENST00000508063 PPP1R42Q7Z4L9 355 aa14.48□□□□□ -0.09
PTPN13-207ENST00000508063 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
PTPN13-207ENST00000508063 CEP350Q5VT06 3117 aa14.47□□□□□ -0.09
PTPN13-207ENST00000508063 CHL1O00533 1208 aa14.47□□□□□ -0.09
PTPN13-207ENST00000508063 GPTP24298 496 aa14.47□□□□□ -0.09
PTPN13-207ENST00000508063 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
PTPN13-207ENST00000508063 RTKN2Q8IZC4 609 aa14.47□□□□□ -0.09
PTPN13-207ENST00000508063 SMC1BQ8NDV3 1235 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms