RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 STK25O00506 426 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 NUDT7P0C024 238 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 GYS1P13807 737 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
RPS3A-206ENST00000507485 IL13P35225 146 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
RPS3A-206ENST00000507485 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
RPS3A-206ENST00000507485 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
RPS3A-206ENST00000507485 SLC34A2O95436 690 aa12.34□□□□□ -0.43
RPS3A-206ENST00000507485 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
RPS3A-206ENST00000507485 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
RPS3A-206ENST00000507485 SULT6B1Q6IMI4 303 aa12.34□□□□□ -0.43
RPS3A-206ENST00000507485 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
RPS3A-206ENST00000507485 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
RPS3A-206ENST00000507485 PTCD1O75127 700 aaKnown RBP12.33□□□□□ -0.44
RPS3A-206ENST00000507485 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
RPS3A-206ENST00000507485 CABP4P57796 275 aa12.33□□□□□ -0.44
RPS3A-206ENST00000507485 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
RPS3A-206ENST00000507485 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
RPS3A-206ENST00000507485 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
RPS3A-206ENST00000507485 HSP90AB1P08238 724 aaKnown RBP12.32□□□□□ -0.44
RPS3A-206ENST00000507485 MTHFSP49914 203 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
RPS3A-206ENST00000507485 CEP350Q5VT06 3117 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 DPEP1P16444 411 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 KCNA3P22001 575 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 CRKLP46109 303 aaKnown RBP12.32□□□□□ -0.44
RPS3A-206ENST00000507485 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
RPS3A-206ENST00000507485 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
RPS3A-206ENST00000507485 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
RPS3A-206ENST00000507485 DDR1Q08345 913 aa12.31□□□□□ -0.44
RPS3A-206ENST00000507485 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
RPS3A-206ENST00000507485 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
RPS3A-206ENST00000507485 MRC1P22897 1456 aa12.3□□□□□ -0.44
RPS3A-206ENST00000507485 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
RPS3A-206ENST00000507485 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
RPS3A-206ENST00000507485 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
RPS3A-206ENST00000507485 LHX6Q9UPM6 363 aa12.3□□□□□ -0.44
RPS3A-206ENST00000507485 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
RPS3A-206ENST00000507485 RFC4P35249 363 aa12.29□□□□□ -0.44
RPS3A-206ENST00000507485 TGFB2P61812 414 aa12.29□□□□□ -0.44
RPS3A-206ENST00000507485 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
RPS3A-206ENST00000507485 BCS1LQ9Y276 419 aa12.29□□□□□ -0.44
RPS3A-206ENST00000507485 KNSTRNQ9Y448 316 aa12.29□□□□□ -0.44
RPS3A-206ENST00000507485 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
RPS3A-206ENST00000507485 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
RPS3A-206ENST00000507485 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
RPS3A-206ENST00000507485 HMOX1P09601 288 aa12.28□□□□□ -0.44
RPS3A-206ENST00000507485 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
RPS3A-206ENST00000507485 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
RPS3A-206ENST00000507485 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
RPS3A-206ENST00000507485 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.44
RPS3A-206ENST00000507485 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.44
RPS3A-206ENST00000507485 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.44
RPS3A-206ENST00000507485 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
RPS3A-206ENST00000507485 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
RPS3A-206ENST00000507485 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
RPS3A-206ENST00000507485 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
RPS3A-206ENST00000507485 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
RPS3A-206ENST00000507485 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
RPS3A-206ENST00000507485 ECM2O94769 699 aaPredicted RBP12.26□□□□□ -0.45
RPS3A-206ENST00000507485 HSPA6P17066 643 aa12.26□□□□□ -0.45
RPS3A-206ENST00000507485 TM4SF1P30408 202 aa12.26□□□□□ -0.45
RPS3A-206ENST00000507485 CHRNA5P30532 468 aa12.26□□□□□ -0.45
RPS3A-206ENST00000507485 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
RPS3A-206ENST00000507485 ARHGAP27Q6ZUM4 889 aa12.26□□□□□ -0.45
RPS3A-206ENST00000507485 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
RPS3A-206ENST00000507485 SOS1Q07889 1333 aaPredicted RBP12.25□□□□□ -0.45
RPS3A-206ENST00000507485 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
RPS3A-206ENST00000507485 FCHSD2O94868 740 aa12.25□□□□□ -0.45
RPS3A-206ENST00000507485 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
RPS3A-206ENST00000507485 USPL1Q5W0Q7 1092 aa12.25□□□□□ -0.45
RPS3A-206ENST00000507485 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
RPS3A-206ENST00000507485 NRXN2Q9P2S2 1712 aa12.24□□□□□ -0.45
RPS3A-206ENST00000507485 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
RPS3A-206ENST00000507485 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
RPS3A-206ENST00000507485 ZBTB1Q9Y2K1 713 aa12.24□□□□□ -0.45
RPS3A-206ENST00000507485 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
RPS3A-206ENST00000507485 SBF1O95248 1867 aa12.22□□□□□ -0.45
RPS3A-206ENST00000507485 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
RPS3A-206ENST00000507485 COL15A1P39059 1388 aa12.22□□□□□ -0.45
RPS3A-206ENST00000507485 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
RPS3A-206ENST00000507485 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
RPS3A-206ENST00000507485 PRELPP51888 382 aa12.21□□□□□ -0.45
RPS3A-206ENST00000507485 NFIXQ14938 502 aa12.21□□□□□ -0.45
RPS3A-206ENST00000507485 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
RPS3A-206ENST00000507485 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.46
RPS3A-206ENST00000507485 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.46
RPS3A-206ENST00000507485 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.46
RPS3A-206ENST00000507485 DLEC1Q9Y238 1755 aa12.2□□□□□ -0.46
RPS3A-206ENST00000507485 DALRD3Q5D0E6 543 aaKnown RBP12.2□□□□□ -0.46
RPS3A-206ENST00000507485 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
RPS3A-206ENST00000507485 NARFQ9UHQ1 456 aa12.2□□□□□ -0.46
RPS3A-206ENST00000507485 TK2O00142 265 aa12.19□□□□□ -0.46
RPS3A-206ENST00000507485 RASSF7Q02833 373 aa12.19□□□□□ -0.46
RPS3A-206ENST00000507485 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
RPS3A-206ENST00000507485 ZPR1O75312 459 aa12.18□□□□□ -0.46
RPS3A-206ENST00000507485 TOMM70O94826 608 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms