RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 LTBP3Q9NS15 1303 aa17.96■□□□□ 0.46
POLR2J3-212ENST00000507355 PRKAR2BP31323 418 aa17.95■□□□□ 0.46
POLR2J3-212ENST00000507355 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
POLR2J3-212ENST00000507355 CNBD1Q8NA66 436 aa17.95■□□□□ 0.46
POLR2J3-212ENST00000507355 AIDAQ96BJ3 306 aa17.95■□□□□ 0.46
POLR2J3-212ENST00000507355 ARFGEF2Q9Y6D5 1785 aa17.94■□□□□ 0.46
POLR2J3-212ENST00000507355 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
POLR2J3-212ENST00000507355 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
POLR2J3-212ENST00000507355 NUDCQ9Y266 331 aa17.94■□□□□ 0.46
POLR2J3-212ENST00000507355 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 KCNQ3O43525 872 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 A1BGP04217 495 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 SETDB2Q96T68 719 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
POLR2J3-212ENST00000507355 PPP2R1AP30153 589 aa17.92■□□□□ 0.46
POLR2J3-212ENST00000507355 VEGFBP49765 207 aa17.92■□□□□ 0.46
POLR2J3-212ENST00000507355 ST5P78524 1137 aa17.92■□□□□ 0.46
POLR2J3-212ENST00000507355 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
POLR2J3-212ENST00000507355 SCN4AP35499 1836 aa17.92■□□□□ 0.46
POLR2J3-212ENST00000507355 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 SRGNP10124 158 aa17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 IL6STP40189 918 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 SOGA3Q5TF21 947 aa17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 TAF1DQ9H5J8 278 aaPredicted RBP17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 PRDM10Q9NQV6 1147 aa17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
POLR2J3-212ENST00000507355 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-212ENST00000507355 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
POLR2J3-212ENST00000507355 MASTLQ96GX5 879 aa17.9■□□□□ 0.46
POLR2J3-212ENST00000507355 CAMTA2O94983 1202 aa17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 LBX1P52954 281 aa17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 L3MBTL3Q96JM7 780 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
POLR2J3-212ENST00000507355 MCM10Q7L590 875 aa17.88■□□□□ 0.45
POLR2J3-212ENST00000507355 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-212ENST00000507355 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-212ENST00000507355 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
POLR2J3-212ENST00000507355 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-212ENST00000507355 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
POLR2J3-212ENST00000507355 ZNF277Q9NRM2 450 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-212ENST00000507355 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
POLR2J3-212ENST00000507355 ITGBL1O95965 494 aaPredicted RBP17.86■□□□□ 0.45
POLR2J3-212ENST00000507355 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
POLR2J3-212ENST00000507355 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
POLR2J3-212ENST00000507355 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
POLR2J3-212ENST00000507355 FKBP4Q02790 459 aaKnown RBP eCLIP17.85■□□□□ 0.45
POLR2J3-212ENST00000507355 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
POLR2J3-212ENST00000507355 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
POLR2J3-212ENST00000507355 WBP1LQ9NX94 342 aa17.85■□□□□ 0.45
POLR2J3-212ENST00000507355 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
POLR2J3-212ENST00000507355 SNRPA1P09661 255 aaKnown RBP17.84■□□□□ 0.45
POLR2J3-212ENST00000507355 EPHX2P34913 555 aa17.84■□□□□ 0.45
POLR2J3-212ENST00000507355 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
POLR2J3-212ENST00000507355 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-212ENST00000507355 NPR1P16066 1061 aa17.83■□□□□ 0.44
POLR2J3-212ENST00000507355 ABT1Q9ULW3 272 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-212ENST00000507355 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 HSPA8P11142 646 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 ABHD8Q96I13 439 aa17.82■□□□□ 0.44
POLR2J3-212ENST00000507355 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
POLR2J3-212ENST00000507355 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
POLR2J3-212ENST00000507355 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-212ENST00000507355 RASSF10A6NK89 507 aa17.8■□□□□ 0.44
POLR2J3-212ENST00000507355 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-212ENST00000507355 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
POLR2J3-212ENST00000507355 PNMA8AQ86V59 439 aaPredicted RBP17.8■□□□□ 0.44
POLR2J3-212ENST00000507355 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 NIP7Q9Y221 180 aaKnown RBP eCLIP17.79■□□□□ 0.44
POLR2J3-212ENST00000507355 SLC34A2O95436 690 aa17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 NEFMP07197 916 aa17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 MAP2K1Q02750 393 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 GRM1Q13255 1194 aa17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 SYNE4Q8N205 404 aa17.78■□□□□ 0.44
POLR2J3-212ENST00000507355 FZD9O00144 591 aa17.77■□□□□ 0.44
POLR2J3-212ENST00000507355 GPC2Q8N158 579 aa17.77■□□□□ 0.44
POLR2J3-212ENST00000507355 GJA3Q9Y6H8 435 aa17.77■□□□□ 0.44
POLR2J3-212ENST00000507355 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
POLR2J3-212ENST00000507355 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
POLR2J3-212ENST00000507355 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
POLR2J3-212ENST00000507355 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
POLR2J3-212ENST00000507355 JDP2Q8WYK2 163 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms