RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 SLC9A9Q8IVB4 645 aa5.55□□□□□ -1.52
SRPK1-208ENST00000507292 Q8N3U1 123 aa5.55□□□□□ -1.52
SRPK1-208ENST00000507292 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
SRPK1-208ENST00000507292 NEUROD4Q9HD90 331 aa5.55□□□□□ -1.52
SRPK1-208ENST00000507292 ELOA3CA0A087WX78 387 aaPredicted RBP5.54□□□□□ -1.52
SRPK1-208ENST00000507292 ELOA3DA6NLF2 546 aaPredicted RBP5.54□□□□□ -1.52
SRPK1-208ENST00000507292 USP17L5A8MUK1 530 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 LZTS3O60299 673 aaPredicted RBP5.54□□□□□ -1.52
SRPK1-208ENST00000507292 EPHA4P54764 986 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 LAMC2Q13753 1193 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 ELOA3BQ3SY89 546 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 NFATC2IPQ8NCF5 419 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 ELOA3Q8NG57 546 aa5.54□□□□□ -1.52
SRPK1-208ENST00000507292 SERTM1A2A2V5 107 aa5.53□□□□□ -1.52
SRPK1-208ENST00000507292 EML1O00423 815 aa5.53□□□□□ -1.52
SRPK1-208ENST00000507292 ALAS2P22557 587 aa5.53□□□□□ -1.52
SRPK1-208ENST00000507292 SFSWAPQ12872 951 aaKnown RBP5.53□□□□□ -1.52
SRPK1-208ENST00000507292 TPCN2Q8NHX9 752 aa5.53□□□□□ -1.52
SRPK1-208ENST00000507292 SLC30A3Q99726 388 aa5.53□□□□□ -1.52
SRPK1-208ENST00000507292 POM121CA8CG34 1229 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 ZBTB7BO15156 539 aaPredicted RBP5.52□□□□□ -1.53
SRPK1-208ENST00000507292 RAB44Q7Z6P3 723 aaPredicted RBP5.52□□□□□ -1.53
SRPK1-208ENST00000507292 WWC1Q8IX03 1113 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 RHPN1Q8TCX5 695 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 C7orf43Q8WVR3 580 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 SEMA6BQ9H3T3 888 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 KIAA1024Q9UPX6 916 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 HCN4Q9Y3Q4 1203 aa5.52□□□□□ -1.53
SRPK1-208ENST00000507292 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 SPATA31C1P0DKV0 1188 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 ITGB7P26010 798 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 GATA4P43694 442 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 C8orf86Q6ZUL3 223 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 TRIM50Q86XT4 487 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 ADAMTS19Q8TE59 1207 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 MDFIQ99750 246 aa5.51□□□□□ -1.53
SRPK1-208ENST00000507292 TSPAN10Q9H1Z9 355 aaPredicted RBP5.51□□□□□ -1.53
SRPK1-208ENST00000507292 USP17L3A6NCW0 530 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 USP17L4A6NCW7 530 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 M0R082 166 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 RAD21O60216 631 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 SIN3BO75182 1162 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 CLDN10P78369 228 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 SPEM2Q0P670 501 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 CCDC102BQ68D86 513 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 USP17L2Q6R6M4 530 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 USP17L1Q7RTZ2 530 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 ZNF417Q8TAU3 575 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 CEP63Q96MT8 703 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 ZNF587Q96SQ5 575 aaPredicted RBP5.5□□□□□ -1.53
SRPK1-208ENST00000507292 STARD13Q9Y3M8 1113 aa5.5□□□□□ -1.53
SRPK1-208ENST00000507292 SFI1A8K8P3 1242 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 PRKCSHP14314 528 aaPredicted RBP5.49□□□□□ -1.53
SRPK1-208ENST00000507292 PRRT3Q5FWE3 981 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 HDGFL1Q5TGJ6 251 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 ZNF280CQ8ND82 737 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 BRD7Q9NPI1 651 aa5.49□□□□□ -1.53
SRPK1-208ENST00000507292 GPC6Q9Y625 555 aaPredicted RBP5.49□□□□□ -1.53
SRPK1-208ENST00000507292 SPDYE3A6NKU9 549 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 ADARB2-AS1A8MUL3 147 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 APBA3O96018 575 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 ALBP02768 609 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 UBTFP17480 764 aaKnown RBP5.48□□□□□ -1.53
SRPK1-208ENST00000507292 ADH7P40394 386 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 PSMA6P60900 246 aaKnown RBP5.48□□□□□ -1.53
SRPK1-208ENST00000507292 COL9A3Q14050 684 aaPredicted RBP5.48□□□□□ -1.53
SRPK1-208ENST00000507292 PLEKHM2Q8IWE5 1019 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 OGFOD1Q8N543 542 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 TSEN2Q8NCE0 465 aaKnown RBP5.48□□□□□ -1.53
SRPK1-208ENST00000507292 TNFRSF25Q93038 417 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
SRPK1-208ENST00000507292 UCN2Q96RP3 112 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 CHMP3Q9Y3E7 222 aa5.48□□□□□ -1.53
SRPK1-208ENST00000507292 NEUROD1Q13562 356 aa5.47□□□□□ -1.53
SRPK1-208ENST00000507292 C1orf53Q5VUE5 145 aa5.47□□□□□ -1.53
SRPK1-208ENST00000507292 MICALL1Q8N3F8 863 aa5.47□□□□□ -1.53
SRPK1-208ENST00000507292 SUSD3Q96L08 255 aa5.47□□□□□ -1.53
SRPK1-208ENST00000507292 ANKIB1Q9P2G1 1089 aa5.47□□□□□ -1.53
SRPK1-208ENST00000507292 MKRN1Q9UHC7 482 aaKnown RBP5.47□□□□□ -1.53
SRPK1-208ENST00000507292 ATP9BO43861 1147 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 PPP1R12BO60237 982 aaPredicted RBP5.46□□□□□ -1.54
SRPK1-208ENST00000507292 TYRO3Q06418 890 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 TBC1D8BQ0IIM8 1120 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 TRIM28Q13263 835 aaKnown RBP5.46□□□□□ -1.54
SRPK1-208ENST00000507292 GRIK4Q16099 956 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 LARGE2Q8N3Y3 721 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 BHMTQ93088 406 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 IGFLR1Q9H665 355 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 KCNH4Q9UQ05 1017 aa5.46□□□□□ -1.54
SRPK1-208ENST00000507292 PALM3A6NDB9 673 aaPredicted RBP5.45□□□□□ -1.54
SRPK1-208ENST00000507292 C21orf2O43822 256 aa5.45□□□□□ -1.54
SRPK1-208ENST00000507292 HIRAP54198 1017 aaPredicted RBP5.45□□□□□ -1.54
SRPK1-208ENST00000507292 RSPO4Q2I0M5 234 aaPredicted RBP5.45□□□□□ -1.54
SRPK1-208ENST00000507292 ZMYM1Q5SVZ6 1142 aa5.45□□□□□ -1.54
SRPK1-208ENST00000507292 ALDH16A1Q8IZ83 802 aa5.45□□□□□ -1.54
SRPK1-208ENST00000507292 CHMP7Q8WUX9 453 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms